Pairwise Alignments

Query, 598 a.a., peptidase, M1 family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 606 a.a., peptidase M1, membrane alanine aminopeptidase (RefSeq) from Shewanella loihica PV-4

 Score =  820 bits (2117), Expect = 0.0
 Identities = 404/589 (68%), Positives = 469/589 (79%), Gaps = 1/589 (0%)

Query: 6   TAWDLTRDYHSFANTDQVQVTHLSLTLTVDFEARTLLGEAVLSLRYIESQVAELWLDTRG 65
           T WD  +D+HSFAN D ++VTHLSL L VDF A+ L+G A L+L Y E     L+LDTR 
Sbjct: 15  TQWDNQQDHHSFANVDALRVTHLSLALEVDFAAQQLIGCARLNLDYREQDCRILYLDTRD 74

Query: 66  LAILSVMTEAQVPLEFSLEESNEILGQKLSIRLPQLQCERVCIRYLTSMQAQGLQWLAPE 125
           L I SV+ EA   L + ++E + + GQ+L+I L     ++V + Y TS  AQGLQWL+PE
Sbjct: 75  LTITSVLDEAGNALVYRVDEQDVVRGQRLAIELSS-PSKQVTVHYHTSPSAQGLQWLSPE 133

Query: 126 QTAGKQLPYLFSQSQPINARSWIPLQDTPKVRITFDAKVQVPKGMRAVMSAMNHPETPLE 185
           QT+GKQLP+LFSQSQPINARSWIPLQD+PK RITFDAK+ VP GMRAVMSAMNH + PL 
Sbjct: 134 QTSGKQLPFLFSQSQPINARSWIPLQDSPKARITFDAKITVPPGMRAVMSAMNHGDAPLT 193

Query: 186 GTFQFEMEKPIPTHLLALAVGDLAFQVIGPRSGVYTEPCMLEAAATEFADTEHMLDVAQS 245
           G F FEMEKPIPTHLLA+AVGDL F  IGPR+GVY EP +L AA  EF DTE M+++A+S
Sbjct: 194 GEFSFEMEKPIPTHLLAIAVGDLHFGAIGPRTGVYAEPEVLSAAVKEFEDTEKMVEIAES 253

Query: 246 LLGPYAWGRYDMIILPPSFPFGGMENPRLAFLTPTLIAGDKSLVSTVAHELAHSWTGNLV 305
           LLGPYAW RYDM+ILPPSFPFGGMENPRLAF+TPTLIAGDKSLVSTVAHELAHSWTGNLV
Sbjct: 254 LLGPYAWDRYDMLILPPSFPFGGMENPRLAFMTPTLIAGDKSLVSTVAHELAHSWTGNLV 313

Query: 306 SNATWRDLWLNEGFTTYFTNRIVEQVYGREQAELEWVIEFGRLQEEIAALPLHRQTLPAN 365
           SNATWRDLWLNEGFTTYFTNRIVE VYG+E AELE V+E+GRL+EE+ ++PL  QTLPAN
Sbjct: 314 SNATWRDLWLNEGFTTYFTNRIVEAVYGKELAELEVVLEYGRLKEELVSMPLEAQTLPAN 373

Query: 366 VQQADPNLAFNRFTYDKASMFVHDLERRLGRAEFDKFLFTYVQHFAFKAITTEMFVKYAK 425
           VQ  DPN AFNRFTYDKASMFVH+LE RLGR  FD+FLF YV HFAF+AITTE FV YA+
Sbjct: 374 VQAGDPNDAFNRFTYDKASMFVHELEHRLGREAFDRFLFEYVNHFAFEAITTETFVDYAR 433

Query: 426 AALVEAYPDKISEAELLEWIYGEGLPQGYVGPTSRSLDKVDDALNDFLQGKAAALLNVKS 485
             L+  Y DKI+EAELLEW+YGEG+P  +V P+S SL+KVD     +L G+     N  +
Sbjct: 434 QTLLVQYGDKITEAELLEWVYGEGMPAWFVPPSSDSLEKVDALRAAWLGGEPINKANTAN 493

Query: 486 WRVHHWQYFLTQLPEVLSQVQLMDLDDSFKLTESNNAEIACDWFRVAIRNHYDPVLPALS 545
           WRVHHWQYFL  LPEVL Q  L+DLD SF  + S NAEIACDW+RVAIRNHYDPVLP + 
Sbjct: 494 WRVHHWQYFLNSLPEVLEQEALIDLDTSFDFSRSTNAEIACDWYRVAIRNHYDPVLPFVE 553

Query: 546 RYLQRIGRGKFVRPLYAELNIAGYHTELQSIYSSARSGYHPSIQVQLDR 594
            YL +IGRGKFVRPLY EL +AGY  EL+ IY  AR+GYHPS+ VQLD+
Sbjct: 554 AYLMKIGRGKFVRPLYNELLLAGYGEELRRIYQKARAGYHPSLSVQLDK 602