Pairwise Alignments

Query, 321 a.a., outer membrane porin, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 353 a.a., membrane protein from Cupriavidus basilensis FW507-4G11

 Score = 62.8 bits (151), Expect = 1e-14
 Identities = 86/348 (24%), Positives = 144/348 (41%), Gaps = 44/348 (12%)

Query: 13  LASATLASAYAAEPLTVYGKLNVTAQSNDENGDA------TTTIQSNASRFGVKGDFELS 66
           L SA L +      +T+YG ++ T + +     A       T  +   SR+G++G  +L 
Sbjct: 11  LGSAALPAFAQQSGVTLYGLVDTTIRYSTHANAAGNSKWEMTDGELTGSRWGLRGTEDLG 70

Query: 67  SSLSAFYTVE--YQVDTGAA-SSDNFTARNQFVGLKGDFGSFSVGRNDTLLK--ISQGDV 121
           ++L AFY +E  +  DTG++        R   +GL GD+G  ++GR  TL    +S  + 
Sbjct: 71  NNLKAFYILESGFSPDTGSSQQGGRLFGRTAVIGLDGDYGKLALGRQYTLAHEILSSYEA 130

Query: 122 DQF--NDLSGDLGKLFKGEVRAAQTATYLTPSFGDFVFGVTYVAEGNDVKSQFAQDGFSV 179
             F  N + G  G  + G +R   T  Y+  SFG       Y   G    S  A +  + 
Sbjct: 131 MAFANNSIVGYQGGNYTG-LRYDNTIKYI-KSFGGLQAAAAYTF-GEVAGSIKASNASAG 187

Query: 180 AAMYGDAKLKKTAVYAALAYDSDVSGYEVLRASLQAKLAGIKLGGMYQQQEQTYKLDKTT 239
           + +Y    ++  AVY  + +D   + +  + A+  +K     LGG ++     Y L  T 
Sbjct: 188 SLVYSTGPIEVGAVY-QVTHDVSSAFFGAVPAAQASKQTVWGLGGTWKASRAQYYLGYTN 246

Query: 240 SLPVEVTAESATGYLLSAAYDINAVTLKAQFQD--MEDLGDS----WSVG-ADYNLGKPT 292
           +        +  GY+ +      A +    FQ   ++  G+S     + G  DYN  K T
Sbjct: 247 NRLDVADYRNNVGYIGTRVNITEAFSFIGTFQYDWLKHAGESGKRMTTAGMLDYNFSKRT 306

Query: 293 KVF-------------------AFYTNRSLEANTDDDKYIAIGLEHKF 321
            V+                   AF  + ++  NT    ++A GL HKF
Sbjct: 307 DVYVAVDYTHLSGAWIPLNSSPAFNNSGNMFGNTTRLGFMA-GLRHKF 353