Pairwise Alignments

Query, 321 a.a., outer membrane porin, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 378 a.a., porin from Ralstonia sp. UNC404CL21Col

 Score = 60.5 bits (145), Expect = 6e-14
 Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 16/210 (7%)

Query: 9   LASALASATLASAYA-AEPLTVYGKLNVTAQ---SNDENGDATTTIQSNA----SRFGVK 60
           L  A A+  LAS  A A+ +T+YG ++   +     + NG+  T I S      SR+G++
Sbjct: 11  LVLAAATCALASGAANAQSVTLYGLIDTGIEYVSHANTNGNGLTRIPSVTGTLPSRWGLR 70

Query: 61  GDFELSSSLSAFYTVE--YQVDTGAASSDN-FTARNQFVGLKGDFGSFSVGRNDTLLKIS 117
           G  +L + + A +T+E  +  DTG +        R  +VGL  D+G+ ++GR  +++ +S
Sbjct: 71  GAEDLGNGMKAVFTLESGFNTDTGTSGQGGRLFGRQAWVGLASDYGTVTLGRQYSMVFLS 130

Query: 118 QGDVDQFNDLSGDLGKL--FKGEVRAAQTATYLTPSFGDFVFGVTYVAEGNDVKSQFAQD 175
             D D        +G L  +    R   T  Y   +F     G TY + G D        
Sbjct: 131 LADADILGPSQYAIGSLDAYVPNARTDNTIAY-KGTFSGLTVGATY-SFGRDAAGGVPAS 188

Query: 176 GFSVAAMYGDAKLKKTAVYAALAYDSDVSG 205
           G     + G+A   + A+ A + YD+   G
Sbjct: 189 GTCAGEVAGNASACR-AMSAMVKYDAATFG 217