Pairwise Alignments

Query, 321 a.a., outer membrane porin, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 353 a.a., porin from Ralstonia sp. UNC404CL21Col

 Score = 74.3 bits (181), Expect = 4e-18
 Identities = 93/357 (26%), Positives = 152/357 (42%), Gaps = 49/357 (13%)

Query: 4   FCKTLLASALASATLASAYAAEPLTVYGKLNVTAQSNDENG-DATTTIQS---NASRFGV 59
           F   +LA+A A  T  +A A   +T+YG+++  A +    G D    + S   + S +G+
Sbjct: 7   FSLAVLAAA-AGLTAGAAQAQSSVTLYGQVDAWAGATKNLGQDRAWGVNSGGMSTSYWGL 65

Query: 60  KGDFELSSSLSAFYTVE--YQVDTGAAS---SDNFTARNQFVGLKGD-FGSFSVGRNDTL 113
           KG  +L + L A +T+E  ++ DTG +     D+F ARN FVGL+ + +GS  +GRN   
Sbjct: 66  KGSEDLGNGLKAIFTLEAFFRPDTGKSGRFDGDHFFARNSFVGLQSNSWGSIKLGRNTPP 125

Query: 114 LKISQGDVDQF----------------NDLSGDLG-KLFKGEVRAAQTATYLTPSFGDFV 156
             +S    + F                N  SG  G     G+     +  Y TP  G   
Sbjct: 126 YFVSTILFNPFIDSYTFSPMVFHTYLGNGRSGAAGISGLVGDSGWDNSIMYSTPDMGGLT 185

Query: 157 FGVTYVAEGNDVKSQFAQDGFSVAAMYGDAKLKKTAVYAALAYDSDVSGYEVLRASLQAK 216
             + Y A   +      Q+ +  + ++       TA +  + YD        L A    +
Sbjct: 186 GTLIYGA--GEQAGHNGQNKWGGSLLFFRGNFAATAAFQQVRYDGAPGDLNSLVAGFARQ 243

Query: 217 LAG----------IKLGGMYQQQEQTYKLD--KTTSLPVEVTAESATGYLLSAAYDINAV 264
            AG          +KL G YQ  + T      K+    + V+     G +L A+Y   A 
Sbjct: 244 TAGQLGATYDFGVVKLYGQYQYIKNTISTGDAKSNGGQLGVSIPVGPGSIL-ASY---AY 299

Query: 265 TLKAQFQDMEDLGDSWSVGADYNLGKPTKVFAFYTNRSLEANTDDDKYIAIGLEHKF 321
           T  +   D++   ++W+VG DY+L K T V+A Y    +   +  D +  +G+  KF
Sbjct: 300 TKTSGAADVKR--NTWAVGYDYSLSKRTDVYAAYFRDKVSDLSTADTF-GVGIRAKF 353