Pairwise Alignments

Query, 518 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 318 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  123 bits (309), Expect = 8e-33
 Identities = 66/166 (39%), Positives = 98/166 (59%), Gaps = 1/166 (0%)

Query: 352 EQQKLNLLDSLTQLPNRAALEERMELEYRNYQRHKSPLWIAVADIDHFKIINDSFGHSTG 411
           E Q+L+  D LT L NR   EE + L+Y  ++R+ S   + + DIDHFK INDS+GH  G
Sbjct: 150 ELQRLSSTDRLTGLYNRGHWEEMLRLDYARHRRYDSQAALVMFDIDHFKAINDSYGHQVG 209

Query: 412 DKTLQVIAMALKNSLRDTEFVARYGGEEFVLILPDIDDSDIAQLLNRVREKVKNIPFKFK 471
           D  +Q +A  ++ +LRD++   RYGGEEFV++LPD D         R+R+ V+    + +
Sbjct: 210 DSVIQQVADLIRENLRDSDVAGRYGGEEFVVLLPDTDKQGALIFAERLRQAVEAREVRHE 269

Query: 472 NQRITVTVSIGAARVMGNELIH-ETFERADAALYKAKHESRDRVVI 516
             RI  T+S+G A +      H +  E AD+ALY +K   R+RV +
Sbjct: 270 QYRIRFTISLGVADLSMPTTSHAQLIEWADSALYVSKACGRNRVTL 315