Pairwise Alignments

Query, 518 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 308 a.a., GGDEF domain protein from Pseudomonas syringae pv. syringae B728a

 Score =  125 bits (315), Expect = 2e-33
 Identities = 67/160 (41%), Positives = 101/160 (63%), Gaps = 2/160 (1%)

Query: 358 LLDSLTQLPNRAALEERMELEYRNYQRHKSPLWIAVADIDHFKIINDSFGHSTGDKTLQV 417
           L D LT   NR A+++ +  E    +RHK PL + + DIDHFK +ND +GH TGD  L+ 
Sbjct: 148 LRDPLTSTGNRIAMDQGLAREIEISRRHKQPLSLLMLDIDHFKKVNDEYGHHTGDDVLKT 207

Query: 418 IAMALKNSLRDTEFVARYGGEEFVLILPDIDDSDIAQLL-NRVREKVKNIPFKFKNQRIT 476
           +A +LK  LR+ + V RYGGEEFV+IL +   +D A+L+  R+ + V+N+ F+  +  +T
Sbjct: 208 VAQSLKAQLRNIDRVFRYGGEEFVVILSN-TGADSAELIGQRLCQAVRNLEFRELSPALT 266

Query: 477 VTVSIGAARVMGNELIHETFERADAALYKAKHESRDRVVI 516
           +TVS+G + ++  E       RAD ALY AK E R+R+ +
Sbjct: 267 MTVSLGCSTLLPTETADSLLRRADNALYVAKREGRNRIAM 306