Pairwise Alignments

Query, 518 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 509 a.a., GGDEF domain protein from Pseudomonas syringae pv. syringae B728a

 Score =  113 bits (283), Expect = 1e-29
 Identities = 64/158 (40%), Positives = 93/158 (58%), Gaps = 4/158 (2%)

Query: 360 DSLTQLPNRAALEERMELEYRNYQRHKSPLWIAVADIDHFKIINDSFGHSTGDKTLQVIA 419
           D LT L NR  L+E ME+E+   QR   PL + + D+DHFK  N+  GH  GD+ L++IA
Sbjct: 339 DGLTGLDNRRQLDEAMEIEWARAQRSGKPLSLLMIDVDHFKAFNERHGHQGGDEALRLIA 398

Query: 420 MALKNSL-RDTEFVARYGGEEFVLILPDIDDSDIAQLLNRVREKVKNIPFKFKNQRITVT 478
             +   + R  + VARYGGEEFV++LP+ D      +  ++R+  +++P  F+N    +T
Sbjct: 399 QTISYCIRRPGDRVARYGGEEFVVVLPETDLPGAMLIAEKIRKAAESLPL-FRNAEHPIT 457

Query: 479 VSIGAAR--VMGNELIHETFERADAALYKAKHESRDRV 514
           VSIG A   V   + +   F  AD ALY+AK   R+RV
Sbjct: 458 VSIGVASEVVRQGDKLEAFFGVADKALYQAKDNGRNRV 495