Pairwise Alignments

Query, 518 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 457 a.a., PleD family two-component system response regulator from Rhodopseudomonas palustris CGA009

 Score =  115 bits (289), Expect = 3e-30
 Identities = 63/164 (38%), Positives = 93/164 (56%), Gaps = 3/164 (1%)

Query: 355 KLNLLDSLTQLPNRAALEERMELEYRNYQRHKSPLWIAVADIDHFKIINDSFGHSTGDKT 414
           ++ + D LT L NR  +E  +            PL + + DID FK INDS+GH  GD  
Sbjct: 290 EMAITDGLTGLHNRRYMESHLATLAEQAGARGKPLALMILDIDFFKSINDSYGHDAGDDV 349

Query: 415 LQVIAMALKNSLRDTEFVARYGGEEFVLILPDIDDSDIAQLLNRVREKVKNIPFKFK--N 472
           L+  A+ +K S+R  +   RYGGEEFV+++P+ D      +  R+R  +   PF  +   
Sbjct: 350 LREFALRIKKSIRGIDLACRYGGEEFVIVMPETDLHVAQMVAERLRRAIAGEPFAIEKGT 409

Query: 473 QRITVTVSIGAARV-MGNELIHETFERADAALYKAKHESRDRVV 515
           +RI VT+SIG + +    E I +  +RAD ALY+AKH+ R+RVV
Sbjct: 410 RRIEVTISIGLSTLERKGEPIPDLLKRADTALYRAKHDGRNRVV 453