Pairwise Alignments

Query, 518 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 323 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  113 bits (282), Expect = 1e-29
 Identities = 62/166 (37%), Positives = 99/166 (59%), Gaps = 5/166 (3%)

Query: 354 QKLNLLDSLTQLPNRAALEERMELEYRNYQRHKSPLWIAVADIDHFKIINDSFGHSTGDK 413
           + L+  D LTQL NR   +  M+ E+  + R+  P  + + DIDHFK IND++GH  GD+
Sbjct: 153 EHLSQTDGLTQLHNRRHWQLCMQKEFDRHARYGEPTTLVMFDIDHFKRINDTYGHIAGDR 212

Query: 414 TLQVIAMALKNSLRDTEFVARYGGEEFVLILPDIDDSDIAQLLNRVREKVKNIPFKFKNQ 473
            +Q ++  L+ SLRDT+   RYGGEEF ++L + +        +R+REK++    +F++ 
Sbjct: 213 VIQHVSHILRQSLRDTDCAGRYGGEEFSVVLSNTNAEAALHFADRLREKIEASELRFESA 272

Query: 474 RITVTVSIGAARV---MGNELIHETFERADAALYKAKHESRDRVVI 516
            + VTVSIG   +   + N    +   +AD+ALY+AK + R+  VI
Sbjct: 273 ILKVTVSIGICGIDEHLSNSA--QWLGQADSALYQAKQKGRNCCVI 316