Pairwise Alignments

Query, 518 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 466 a.a., diguanylate cyclase from Herbaspirillum seropedicae SmR1

 Score =  113 bits (282), Expect = 2e-29
 Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 13/207 (6%)

Query: 317 LEQREQAL--LRKSMETMRKELNELSNEANTYKERLFEQQKLNLLDSLTQLPNRAALEER 374
           LEQ +Q+L  L +S+E    E      +AN       + + L+L D LT + NR + +E 
Sbjct: 258 LEQEKQSLSALNRSLELRIAERTRDLAQANE------QLRSLSLTDGLTGIANRRSFDET 311

Query: 375 MELEYRNYQRHKSPLWIAVADIDHFKIINDSFGHSTGDKTLQVIAMALKNSL-RDTEFVA 433
           +E E+R   RH +PL +A  D+D FK  ND +GH  GD  L+ +A  L+ S+ R  + VA
Sbjct: 312 LEQEWRRSMRHGTPLMLAFIDVDWFKPYNDHYGHLAGDAVLRQVAQTLRQSIARVGDTVA 371

Query: 434 RYGGEEFVLILPDIDDSDIAQLLNRVREKVKNIPFKFKNQRI-TVTVSIGAARVMGNEL- 491
           RYGGEEF +I  D D    A +L R+ + V  +        +  +T+S G A     +  
Sbjct: 372 RYGGEEFAIIAADTDGQAGADMLRRMCDAVHALAIAHAGSAMGRITISAGVASCNPGQPG 431

Query: 492 --IHETFERADAALYKAKHESRDRVVI 516
             +    + ADAALY+AK E R+RVV+
Sbjct: 432 AGLDGLLQAADAALYRAKMEGRNRVVL 458