Pairwise Alignments

Query, 622 a.a., deoxyxylulose-5-phosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 639 a.a., 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) from Xanthomonas campestris pv. campestris strain 8004

 Score =  718 bits (1854), Expect = 0.0
 Identities = 362/623 (58%), Positives = 459/623 (73%), Gaps = 11/623 (1%)

Query: 1   MSLDISQFPVLAQANTPNELRQLPQALLPQLADELREFLLKSVGMSSGHFASGLGTVELT 60
           M +D +++P L++  TP++LR   +A L  +ADELR +L++SVG S GHFA+GLG +ELT
Sbjct: 1   MMIDSTRYPRLSRIQTPDDLRTFEEADLTAVADELRAYLIESVGKSGGHFAAGLGVIELT 60

Query: 61  VALHYVYNTPFDRLIWDVGHQAYPHKILTGRRDRMHTIRQKNGLHPFPWREESEYDTFSV 120
           VALHY+Y TP D+L+WDVGHQ YPHKILTGRRD++HT++QK+G+ PFP REES YDTF V
Sbjct: 61  VALHYLYQTPVDQLVWDVGHQTYPHKILTGRRDQIHTVKQKDGVAPFPKREESVYDTFGV 120

Query: 121 GHSGTSISAALAMAVAAEKEQAGRKVVAVIGDGAMTGGMVFEAMNHAG--DLHNDMLMVL 178
           GHS TSISAAL MA+AA++    RKVVAVIGDGAMT GMV+EA+NHAG  D   ++L++L
Sbjct: 121 GHSSTSISAALGMAIAAQRNGDDRKVVAVIGDGAMTAGMVYEALNHAGGMDPEPNLLVIL 180

Query: 179 NDNEMSISENVGALNNHLAQLMSGRFYTTIRESSKKVL---KGMPVIKEMAKRTEEHLKG 235
           NDN MSISE VG L   L +    R    IRE  KK+L   K  P  +   +R EEH KG
Sbjct: 181 NDNRMSISEAVGGLTKMLGRASGSRTLNAIREGGKKILGDKKNNPTAR-FVRRWEEHWKG 239

Query: 236 MVVPGTLFEELGFNYIGPIDGHDVDALVETLRNMRNLKGPQVLHIMTKKGRGYEPAEKDP 295
           M VP TLFEE+GF+Y GPIDGHD+ +LV  L+ ++ LKGPQ+LH++T KG+GYE AE D 
Sbjct: 240 MFVPSTLFEEMGFHYTGPIDGHDLPSLVGALKTLKTLKGPQLLHVITTKGKGYELAEGDQ 299

Query: 296 IGWHAVPKFDPS--LFKKPATKPGLPTFSQVFGKWLCDIAEQDEKVLGITPAMREGSGMV 353
           IG+HAV  FDPS  L  K   K   PT++ VF  W+CD+A  D K+L ITPAMREGSG+V
Sbjct: 300 IGYHAVGPFDPSKGLVAKAGAKK--PTYTDVFSDWVCDMAAADPKMLVITPAMREGSGLV 357

Query: 354 EFSQRFPKQYFDAAIAEQHAVTLGAGFACEGYKPVVAIYSTFLQRGYDQLIHDVALQRLP 413
            FS+ +P++YFD AIAEQHAVTL AG A +G KPVVAIYSTFLQRGYDQL+HDVA+Q+L 
Sbjct: 358 RFSKEYPQRYFDVAIAEQHAVTLAAGMATQGAKPVVAIYSTFLQRGYDQLVHDVAVQKLD 417

Query: 414 VLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSA 473
           VLFAIDRGG+VG DG TH G  DLSF+RC+P+MV+MAP+DE ECRQML TG  Y+ GP+A
Sbjct: 418 VLFAIDRGGVVGPDGATHAGNLDLSFLRCVPHMVVMAPADEAECRQMLTTGLRYE-GPAA 476

Query: 474 VRYPRGSATGATQVEAMTALPIGKGVIKRLGKRIALLNFGTTLAAALTAAESLDATVVDM 533
           VRYPRG+  G     A+T LPIGK  ++  G RIALL FG T+ AA      L  TVV+M
Sbjct: 477 VRYPRGTGPGTALDAALTTLPIGKAQLRHSGARIALLGFGATVDAAEAVGRELGLTVVNM 536

Query: 534 RFVKPLDVDLVKEMAQTHDVLVTVEENAIMGGAGSGVLELLQQLKMPKPVLQIGLPDEFI 593
           RFVKPLD  ++ E+A+ H+  V++E+N + GGAGSGV ELL    +  P+L +GLPD F 
Sbjct: 537 RFVKPLDKAMLLELAKCHEAFVSIEDNVVAGGAGSGVSELLNAEGVLMPMLHLGLPDSFQ 596

Query: 594 KHGSPDEVIHDLQLDAEGMLAQI 616
            H S ++++ +  +D  G+ A +
Sbjct: 597 HHASREDLLAEAGIDQAGIRAAV 619