Pairwise Alignments

Query, 622 a.a., deoxyxylulose-5-phosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 636 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Ralstonia sp. UNC404CL21Col

 Score =  724 bits (1870), Expect = 0.0
 Identities = 364/625 (58%), Positives = 461/625 (73%), Gaps = 13/625 (2%)

Query: 8   FPVLAQANTPNELRQLPQALLPQLADELREFLLKSVGMSSGHFASGLGTVELTVALHYVY 67
           + +L   + P +LR+L +  L  LA+ELR F+L SV  + GH +S LGTVELT+ALHYV+
Sbjct: 3   YELLNTIDDPADLRRLDRRQLGPLANELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVF 62

Query: 68  NTPFDRLIWDVGHQAYPHKILTGRRDRMHTIRQKNGLHPFPWREESEYDTFSVGHSGTSI 127
           NTP DR++WDVGHQ+YPHKILTGRRD+M ++RQ +G+  FP R ES YDTF   HS TSI
Sbjct: 63  NTPEDRIVWDVGHQSYPHKILTGRRDQMGSLRQLDGISGFPRRSESPYDTFGTAHSSTSI 122

Query: 128 SAALAMAVAAEKEQAGRKVVAVIGDGAMTGGMVFEAMNHAGDLHNDM--LMVLNDNEMSI 185
           SAAL MA+ A+     R  +AVIGDGAM+ GM FEAMN+AG ++ D+  ++VLNDN+MSI
Sbjct: 123 SAALGMALGAKTNGEDRVAIAVIGDGAMSAGMAFEAMNNAG-VYKDLPLVVVLNDNDMSI 181

Query: 186 SENVGALNNHLAQLMSGRFYTTIRESSKKVLKGMPVIKEMAKRTEEHLKGMVVPGTLFEE 245
           S  VGALN +LA+LMSG+FY   ++  +K+L   P + E AKR EEH KGM VP T+FEE
Sbjct: 182 SPPVGALNRYLARLMSGQFYAATKKGVEKLLSVAPPVLEFAKRFEEHTKGMFVPATMFEE 241

Query: 246 LGFNYIGPIDGHDVDALVETLRNMRNLK----GPQVLHIMTKKGRGYEPAEKDPIGWHAV 301
            GFNYIGPIDGHD+++LV TL+N+R       GPQ LH++TKKG+GY+ AE DPI +H  
Sbjct: 242 FGFNYIGPIDGHDLESLVPTLQNIRQRAREGGGPQFLHVVTKKGQGYKLAEADPILYHGP 301

Query: 302 PKFDPSLFKKPATKPGLPTFSQVFGKWLCDIAEQDEKVLGITPAMREGSGMVEFSQRFPK 361
            KF+P    KP+ +P   T++QVFG+WLCD+A  D++++GITPAMREGSGMVEF QRFP 
Sbjct: 302 GKFNPQEGIKPSGRPAKVTYTQVFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPD 361

Query: 362 QYFDAAIAEQHAVTLGAGFACEGYKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRG 421
           +Y+D  IAEQHAVT   G ACEG KPVVAIYSTFLQRGYDQLIHDVALQ LPV+FA+DR 
Sbjct: 362 RYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRA 421

Query: 422 GIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSA 481
           G+VGADG TH GA+D++++RCIPNM++M P+DENECRQ+L T +  D  P+AVRYPRG+ 
Sbjct: 422 GLVGADGATHAGAYDIAYLRCIPNMMVMTPADENECRQLLSTAFAQDC-PTAVRYPRGAG 480

Query: 482 TGATQVEAMTALPIGKGVIKR-----LGKRIALLNFGTTLAAALTAAESLDATVVDMRFV 536
           TG      +  LP+GK  ++       G+R+A+L FG+ +A A  AAE LDATVV+MRFV
Sbjct: 481 TGVAVQPTLEPLPLGKAEVRHASAAPAGQRVAILAFGSMVAPASAAAERLDATVVNMRFV 540

Query: 537 KPLDVDLVKEMAQTHDVLVTVEENAIMGGAGSGVLELLQQLKMPKPVLQIGLPDEFIKHG 596
           KPLDV  V EMA+THD +VTVEE  +MGGAGS  LE L    +  PVLQ+GLPD F+ HG
Sbjct: 541 KPLDVACVLEMARTHDYVVTVEEGCVMGGAGSACLEALAAAGIATPVLQLGLPDRFVDHG 600

Query: 597 SPDEVIHDLQLDAEGMLAQINAYLA 621
               ++    LDA G+LA I    A
Sbjct: 601 DHAALLAQCGLDANGILASIRERFA 625