Pairwise Alignments

Query, 622 a.a., deoxyxylulose-5-phosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 635 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Burkholderia phytofirmans PsJN

 Score =  763 bits (1970), Expect = 0.0
 Identities = 378/616 (61%), Positives = 470/616 (76%), Gaps = 9/616 (1%)

Query: 8   FPVLAQANTPNELRQLPQALLPQLADELREFLLKSVGMSSGHFASGLGTVELTVALHYVY 67
           + +L   + P  LR+L +  L  LADELR F+L SV  + GH +S LGTVELT+ALHYV+
Sbjct: 2   YDLLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVF 61

Query: 68  NTPFDRLIWDVGHQAYPHKILTGRRDRMHTIRQKNGLHPFPWREESEYDTFSVGHSGTSI 127
           +TP DR++WDVGHQ YPHKILTGRRD+MHT+RQ  G+  FP R+ESEYDTF   HS TSI
Sbjct: 62  DTPRDRIVWDVGHQTYPHKILTGRRDQMHTLRQLGGISGFPKRDESEYDTFGTAHSSTSI 121

Query: 128 SAALAMAVAAEKEQAGRKVVAVIGDGAMTGGMVFEAMNHAGDLHND--MLMVLNDNEMSI 185
           SAAL MA+A++ +   R  +AVIGDGAMT GM FEAMN+AG + +D  +L++LNDN+MSI
Sbjct: 122 SAALGMAIASKLQGDNRTGIAVIGDGAMTAGMAFEAMNNAG-VEDDVPLLVILNDNDMSI 180

Query: 186 SENVGALNNHLAQLMSGRFYTTIRESSKKVLKGMPVIKEMAKRTEEHLKGMVVPGTLFEE 245
           S  VGALN HLA+LMSGRFY   R   ++VL+  P + ++A++ EEH KGM+VP TLFEE
Sbjct: 181 SPPVGALNRHLARLMSGRFYAAARAGVERVLRVAPPMLDLARKLEEHAKGMIVPATLFEE 240

Query: 246 LGFNYIGPIDGHDVDALVETLRNMRNLKGPQVLHIMTKKGRGYEPAEKDPIGWHAVPKFD 305
            GFNYIGPIDGHD+D+L+ TL+N++ L+GPQ LH++TKKG+GY+ AE DP+ +H   KF+
Sbjct: 241 FGFNYIGPIDGHDLDSLIPTLQNIKELRGPQFLHVVTKKGQGYKLAEADPVLYHGPGKFN 300

Query: 306 PSLFKKPATKPGLPTFSQVFGKWLCDIAEQDEKVLGITPAMREGSGMVEFSQRFPKQYFD 365
           P+   KPAT P   T++QVFG+WLCD AE D +V+GITPAMREGSGMVEF +RFP +YFD
Sbjct: 301 PAEGIKPATTPSKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPDRYFD 360

Query: 366 AAIAEQHAVTLGAGFACEGYKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVG 425
             IAEQHAVT   G A EG KPVVAIYSTFLQR YDQLIHDVALQ LPV+FAIDR G+VG
Sbjct: 361 VGIAEQHAVTFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVG 420

Query: 426 ADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATGAT 485
           ADG TH GA+DL+F+RCIPNM +MA SDENECRQMLYT       P+AVRYPRG+ TG  
Sbjct: 421 ADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLYTA-LQQPNPTAVRYPRGAGTGVA 479

Query: 486 QVEAMTALPIGKGVIKR-----LGKRIALLNFGTTLAAALTAAESLDATVVDMRFVKPLD 540
            V+ M ALP+GKG I+R      GKRIA+L FGT +A +L AAE LDATV +MRFVKPLD
Sbjct: 480 TVKQMAALPLGKGEIRRETSQPAGKRIAILAFGTMVAPSLAAAEQLDATVANMRFVKPLD 539

Query: 541 VDLVKEMAQTHDVLVTVEENAIMGGAGSGVLELLQQLKMPKPVLQIGLPDEFIKHGSPDE 600
             LV+++A+THD +VT+EE  +MGGAGS  +E L +  + +PVLQ+GLPD FI HG P +
Sbjct: 540 AALVRQLAETHDAIVTIEEGCVMGGAGSACVEALLESGVMRPVLQLGLPDRFIDHGDPAK 599

Query: 601 VIHDLQLDAEGMLAQI 616
           ++    LDA G+   I
Sbjct: 600 LLAACGLDAAGITKSI 615