Pairwise Alignments

Query, 547 a.a., D,L-lactate/pyruvate symporter LctP2 (from data) from Shewanella oneidensis MR-1

Subject, 569 a.a., L-lactate permease (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  377 bits (968), Expect = e-109
 Identities = 217/561 (38%), Positives = 332/561 (59%), Gaps = 27/561 (4%)

Query: 4   LQLFASLTPVLSVMIFLVLLRMPASKAMPISMVVTAIAAVFIWQMDTTLLAASVVEGLLS 63
           L    +L P+L  ++ +V +R P+++AMP++ +V  + A+  W +    +AA  ++G+++
Sbjct: 5   LLALVALLPILVALVLMVGMRWPSTRAMPLAWLVCVLGAIGAWNLPAGYIAALSLQGVVT 64

Query: 64  AITPLTIIFGAVFLLNTLKYSGAMDTIRAGFTNISADARVQVIIICWLFGAFIEGSAGFG 123
           AI  L I+FGA+ +L TLKYSG M+TI+ G  NIS D R+Q III ++F AFIEG+AGFG
Sbjct: 65  AIGVLIIVFGAIIILYTLKYSGGMETIQYGMQNISRDKRIQAIIIGYMFAAFIEGAAGFG 124

Query: 124 TPAAIGAPLLVLLGVPPVAAAVVALIADSACVSFGAIGLPVLFGMEQGLIQGGVSMAAEQ 183
           TPAA+ APLL+ LG PP+AAAV+ L+ +S CVSFGA+G P+L G++   +   V  AA  
Sbjct: 125 TPAALAAPLLLSLGFPPLAAAVICLVFNSFCVSFGAVGTPILIGLK--FLAPLVKDAAA- 181

Query: 184 FAAHGGTYAGYARYIVMHMITIDLITGTLI---PLVMVTMLTGFFGRNKSFKEGLAIWKF 240
            A  G  +  +  +  +    + L+ G +I   P+ M+  LT F+G+ KS+ EG A W+F
Sbjct: 182 -ANPGLNFTDFGSFAKVIGQWVTLMHGPMIFILPIFMLGFLTRFYGQKKSWAEGFAAWQF 240

Query: 241 AIFSGLAFTVPAWIINYLAGPEFPSVIGALIGMAMVIPVARKGYLLPKTPWNDFAENDNQ 300
            +F+ +AF VP     +L GPEFPS+IG L+G+ +++  A+KG+ +PK  W DF      
Sbjct: 241 CVFAAVAFIVPYLTFAWLVGPEFPSLIGGLVGLGIIVAGAKKGFCVPKETW-DFGPQSTW 299

Query: 301 DG-----VKLETTAKF----SQIAAWTPYIIMAALLVLSR-TVAPLKAWLSGFNINWTGL 350
           +      +   T  +F    SQ  AW PYI++  +LVL+R     LK W+S   +    +
Sbjct: 300 EAEWTGTIATSTNTEFKPHMSQFMAWLPYILIGVILVLTRIPELGLKGWMSAQKLPINDI 359

Query: 351 LGTE-LKASFATLYAPGAF-FVAVCILGFFLFKMKSPAIKQSIGVSCKSMLPTIISLGAS 408
           LG + + AS   LY PG   F  V +L   L  MK  A+K++   S   M    I+L A+
Sbjct: 360 LGYKGVSASIDYLYLPGTIPFTLVALLTIMLHGMKGDAVKKAWSESFSKMKAPTIALFAA 419

Query: 409 VPMVKIFLNSGANGAGL-----ASMPVALADMLASSMGAVWAWMAPIVGIFGAFLSGSAT 463
           V +V IF  SG   A L      SMP+A+A  +A+  G  W  +A  VG  GAF++GS T
Sbjct: 420 VALVSIFRGSGVADAALNPNNYPSMPLAMAKTVAAFAGNAWPMLASYVGGLGAFITGSNT 479

Query: 464 FSNMMFSSLQYSVADNIGMNHTLVLALQGIGANAGNMMCVMNVVAAATVVGMAGRESEII 523
            S+++F+  Q+ VA  + +   +++A Q  G   GNM+C+ N+VA   V G+ GRE  I+
Sbjct: 480 VSDLLFAEFQWGVAQQLSLPRQIIVAAQVAGGAMGNMVCIHNIVAVCAVTGLIGREGMIL 539

Query: 524 RKTM-PVAIGYALLAGTIATL 543
           ++T  P A+ Y ++ G IA++
Sbjct: 540 KRTFWPFAL-YGIVVGIIASI 559