Pairwise Alignments

Query, 547 a.a., D,L-lactate/pyruvate symporter LctP2 (from data) from Shewanella oneidensis MR-1

Subject, 506 a.a., L-lactate transport (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  227 bits (578), Expect = 9e-64
 Identities = 152/542 (28%), Positives = 271/542 (50%), Gaps = 52/542 (9%)

Query: 1   MTILQLFASLTPVLSVMIFLVLLRMPASKAMPISMVVTAIAAVF-IWQMDTTLLAASVVE 59
           M  LQL A+L P++ ++  LV+L++PA +   +++V T   AVF  W+M   +  ++ +E
Sbjct: 4   MDYLQLAAALAPIVWLIFSLVVLKLPAYRTCALTLVCTLALAVFGWWKMPAFMALSAALE 63

Query: 60  GLLSAITPLTI-IFGAVFLLNTLKYSGAMDTIRAGFTNISADARVQVIIICWLFGAFIEG 118
           G   A+ P+ I I  AVF  N  +++G+MD I    ++I+ D R+ V+I+ W FG F+EG
Sbjct: 64  GAAMALWPIMIVIIAAVFTYNLARHTGSMDVITRMLSSITTDKRLLVLIVAWGFGGFLEG 123

Query: 119 SAGFGTPAAIGAPLLVLLGVPPVAAAVVALIADSACVSFGAIGLPVLFGMEQGLIQGGVS 178
            AG+GT  AI A +L  +G  P+ AAV+ L+A++   +FGAIG+P++       + G   
Sbjct: 124 VAGYGTAVAIPASILAAMGFQPMFAAVICLVANTVPTAFGAIGIPIV------TMAGVTG 177

Query: 179 MAAEQFAAHGGTYAGYARYIVMHMITIDLITGTLIPLVMVTMLTGFFGRNKSFKEGLAIW 238
           +  E  +           Y     + + +I   LI  ++V +  GF G    F      W
Sbjct: 178 LPVETIS-----------YYTALQLFVFII---LITYLLVILTAGFKGIKGVF------W 217

Query: 239 KFAIFSGLAFTVPAWIINYLAGPEFPSVIGALIGMAMVIPVARKGYLLPKTPWNDFAEND 298
              + SGLAF  P        G E P +IG++  M   I  AR  +              
Sbjct: 218 A-TLVSGLAFAFPQLYTAKYMGAELPCLIGSVCSMIATIVWARLFH-------------- 262

Query: 299 NQDGVKLETTAKFSQIAAWTPYIIMAALLVLSRTVAPLKAWLSGFNINWTGLLGTELKAS 358
                +++      ++ AW PYI++ A ++L   + P      G ++  T  +  +   +
Sbjct: 263 RDTAAQVDPIPAAEKVKAWLPYILVFAFIILCSNLFPAIRDALG-SVKTTVRIYGDNPFT 321

Query: 359 FATLYAPGAFFVAVCILGFFLFKMKSPAIKQSIGVSCKSMLPTIISLGASVPMVKIFLNS 418
           F  +  PGA  +    +G  +  +K   I   +G + K ++ + +++ + V + K+   S
Sbjct: 322 FKWIATPGALIIIATYIGGMIQGVKVREITGVLGSTAKKLVYSGVTVVSIVALAKVMSTS 381

Query: 419 GANGAGLASMPVALADMLASSMGAVWAWMAPIVGIFGAFLSGSATFSNMMFSSLQYSVAD 478
           G     + ++ +A+AD    S  + + +++P++G  G F++GS T SN++F  LQ  VA+
Sbjct: 382 GM----INTIAIAVAD----STSSYFPFISPLLGALGTFVTGSDTSSNVLFGQLQMEVAN 433

Query: 479 NIGMNHTLVLALQGIGANAGNMMCVMNVVAAATVVGMAGRESEIIRKTMPVAIGYALLAG 538
            I ++ T +++    GA AG M+   ++  A    G+ G E  I+ +T+ V +GY L+ G
Sbjct: 434 RISIDSTWIVSASAAGATAGKMISPQSIAVATAATGLTGYEGRIMNRTLAVCVGYVLVLG 493

Query: 539 TI 540
           T+
Sbjct: 494 TL 495