Pairwise Alignments

Query, 189 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 220 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score = 46.2 bits (108), Expect = 4e-10
 Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 37/166 (22%)

Query: 61  VDELIAQGLQVISLVEGVTANRDVPPTAHE----------------LRDIDYAVI----- 99
           V   I +  ++ + V+ V A  DVP  AH                 L+D+ +A       
Sbjct: 52  VAHFIEEAQKMATTVDSVAALSDVPAAAHRYLTQHALPLQAIAWQTLQDLHWAEAGLTVE 111

Query: 100 -----PGDV--------GVAENGAIWVNNKNLGHRVTPFICENLILALPIHKIVPNMHQA 146
                 GDV          AE G + + +    +     + E  I  +P  +IV    +A
Sbjct: 112 FRKPQDGDVVGLTGCFCATAETGTLVLLSGPETYASAGLLPETHIAIVPASRIVSGHEEA 171

Query: 147 AKEVTLDAGEFGV---FIAGPSKTADIEQALVVGAHGACSLNVYLV 189
              +  + GE      F++GPS+T DIEQ +V+GAHG   ++V +V
Sbjct: 172 FALIRKERGELPRAVNFVSGPSRTGDIEQTIVLGAHGPYRVHVIVV 217