Pairwise Alignments

Query, 96 a.a., ISSod1, transposase OrfA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 99 a.a., Helix-turn-helix, Fis-type from Pseudomonas syringae pv. syringae B728a

 Score = 57.8 bits (138), Expect = 3e-14
 Identities = 31/89 (34%), Positives = 53/89 (59%), Gaps = 5/89 (5%)

Query: 6  SHKSYPQAFKDEAVLMVLEQGYSVADAAKSLGVSTSLLYNWKEKHEALQQGITLE----- 60
          S + +P  F+ EA  +VL+  YS A A +++GV  + L  W E+    + G+T E     
Sbjct: 2  SKRQFPTEFRLEAARLVLDANYSTAQACEAMGVGATALRRWVEQLRQERGGVTPETANAM 61

Query: 61 ESERDELKRLRRENKELRMEKEILKKASA 89
           +E+ +++ L  + ++L +EKEILKKA+A
Sbjct: 62 TAEQQQIQALHAKIRKLEIEKEILKKATA 90