Pairwise Alignments

Query, 96 a.a., ISSod1, transposase OrfA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 108 a.a., Putative transposase for insertion sequence element IS6110 (fragment) from Mycobacterium tuberculosis H37Rv

 Score = 55.1 bits (131), Expect = 2e-13
 Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 13/101 (12%)

Query: 6   SHKSYPQAFKDEAVLMVLE-------QGYSVADAAKSLGVSTS-LLYNWKEKHEA---LQ 54
           S + YP   ++ AV MV E       +  ++++ A+ LGV  +  +  W  + +     +
Sbjct: 5   SSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGAR 64

Query: 55  QGITLEESERDELKRLRRENKELRMEKEILKKASAFFAREM 95
            G T EES   ELKRLRR+N ELR    ILK ASAFFA E+
Sbjct: 65  PGTTTEESA--ELKRLRRDNAELRRANAILKTASAFFAAEL 103