Pairwise Alignments

Query, 96 a.a., ISSod1, transposase OrfA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 110 a.a., transposase IS3/IS911 family protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 58.9 bits (141), Expect = 2e-14
 Identities = 39/103 (37%), Positives = 52/103 (50%), Gaps = 12/103 (11%)

Query: 1   MSLKKSHKSYPQAFKDEAVLMVLE-------QGYSVADAAKSLGVSTSLLYNW---KEKH 50
           M+  K    Y    +  AV MV E       Q  ++A  A  +G     L  W    EK 
Sbjct: 1   MTKSKMANRYSPEVRARAVRMVFEHQGSYETQAGAIAAIAPKIGCIPQTLREWVKQAEKD 60

Query: 51  EALQQGITLEESERDELKRLRRENKELRMEKEILKKASAFFAR 93
             ++ G+T EE  RD +K L REN+ELR   EIL+KASA+FA+
Sbjct: 61  SGIRDGVTTEE--RDRIKTLERENRELRQANEILRKASAYFAQ 101