Pairwise Alignments

Query, 448 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  267 bits (683), Expect = 4e-76
 Identities = 141/421 (33%), Positives = 238/421 (56%)

Query: 13  LLQEPIAKLFWRYTIPTIASMLVTGVYVTIDGIFVGHYLGETGLAGMMLAYPVGAILYAI 72
           ++   I + F RYTIPT+A+MLV G+Y  +DGIF+GHY+G  GLAG+ +A+PV   +  I
Sbjct: 1   MMNRSIYRQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGI 60

Query: 73  GAMIGMGSAALVSINLGQGNVAKARKLLGNAFSLCLLAGAFFALVGGVFSRDILIALGAE 132
           G ++G+G+ AL SI  G+G+   A+++L       LL     A++    + D L   GAE
Sbjct: 61  GMLVGVGTGALASIKQGEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAE 120

Query: 133 GEILENANEYLFWYFALCHFPIISMAFTTLLRNDGRPSMVTFVLILGGVLNTFLDWLFIV 192
           G + E   +YL      C F + S+A   LLRND  P++ T ++++G + N  LD+LFI 
Sbjct: 121 GRVFELGLQYLQVLIVGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIA 180

Query: 193 VFPFGLAGAAIATMLSQAVTGLLCLQHFFGARTQLKINLEQMKLKLDNCINIARVGLPSF 252
              + L GAAIAT L+Q V  LL L +FF AR  +++    ++L+  +   I  +G+ SF
Sbjct: 181 WLQWELTGAAIATTLAQVVVTLLGLAYFFSARANMRLTRRCLRLEWHSLPKIFAIGVSSF 240

Query: 253 LMNLYLSIVLTLHNTAFLWVGGPLHVAAYGVVSYTEAFFYLIFEGIALGTQPIYSFNAGA 312
            M  Y S ++ LHNT  +  G  + V AY V+ Y    +YL  EGIA G QP+ S++ GA
Sbjct: 241 FMYAYGSTMVALHNTLMIEYGNAVMVGAYAVMGYIVTIYYLTVEGIANGMQPLASYHFGA 300

Query: 313 GRFDRVKQARNIAFSMTLLTAALGLVLIYSRPEWLVYLFAGDNPSLTPVAIEGMRWYFWG 372
             +D +++   +A  + +L     ++++   PE  + +F   +  L   A  G++ + + 
Sbjct: 301 RNYDHIRKLLRLAMGIAVLGGMAFVLVLNLFPEQAIAIFNSSDSELIAGAQMGIKLHLFA 360

Query: 373 LPMEGLILVGASFFQAINCSKQASILTGAKLILIAAIIYCFAWAFGVIGVWVSLATCSTM 432
           + ++G ++V A+++Q+ N   +A  +T   + ++   ++     FG+ GVW++L   + +
Sbjct: 361 MYLDGFLVVSAAYYQSTNRGGKAMFITVGNMSIMLPFLFILPQFFGLTGVWIALPISNIV 420

Query: 433 L 433
           L
Sbjct: 421 L 421