Pairwise Alignments

Query, 448 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 478 a.a., MATE family efflux transporter from Rhodopseudomonas palustris CGA009

 Score = 91.7 bits (226), Expect = 5e-23
 Identities = 81/325 (24%), Positives = 140/325 (43%), Gaps = 10/325 (3%)

Query: 13  LLQEPIAKLFWRYTIPTIASMLVTGVYVTIDGIFVGHYLGETGLAGMMLAYPVGAILYAI 72
           LL + I +   R + P + ++         +  ++G  LG   LA M L +P   +   +
Sbjct: 31  LLDDGILRTLLRLSWPNVVALTAGTCVAVAETSYIGR-LGTEALAAMALVFPFVILTMTM 89

Query: 73  -GAMIGMGSAALVSINLGQGNVAKARKLLGNAFSLCLLAGAFFALVGGVFSRDILIALGA 131
            G  +G G A+ ++  LG G+  +A  L  +A  + L  G  F +    F    L  LG 
Sbjct: 90  SGGAMGGGVASAIARALGSGDDDRAAVLAMHALLIGLCFGLVFTVGMLTFGERALALLGG 149

Query: 132 EGEILENANEYLFWYFALCHFPIISMAFTTLLRNDGRPSMVTFVLILGGVLNTFLDWLFI 191
            G +L  A  Y+  +FA    P +   F  +LR  G   + + +++   VL   L     
Sbjct: 150 RGAVLSQAAGYVHIFFAGAVVPWLMNTFAAILRGTGNMKLPSLMILSSAVLQIVLGGALG 209

Query: 192 VVF----PFGLAGAAIATMLSQAVTGLLCLQHFFGARTQLKINLEQMKLKLDNCINIARV 247
           + F     FG+ G A  T+ + ++   +     F  R  +K  L+  +++    I+I +V
Sbjct: 210 LGFGPIPRFGMPGVAAGTLTAFSIGASVMAWVIFSGRAGVKPRLDGFRIERGMFIDILKV 269

Query: 248 GLPSFLMNLYLSIVLTLHNTAFLWVGGPLHVAAYGVVSYTEAFFYLIFEGIALGTQPIYS 307
           G  S    L   + +T+  T  L   G   +A YG+    E     I   + + + P+  
Sbjct: 270 GAVSCFSPLQSVLTITIF-THMLAHFGTAVLAGYGIGGRLEFMLTSIAFAVGIASVPMIG 328

Query: 308 FNAGAGRFDRVKQARNIAFSMTLLT 332
              GAG   RVK+AR IA++  L++
Sbjct: 329 MAIGAG---RVKRARQIAWTAGLVS 350