Pairwise Alignments

Query, 448 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 475 a.a., MATE family efflux transporter from Dyella japonica UNC79MFTsu3.2

 Score = 84.7 bits (208), Expect = 6e-21
 Identities = 84/346 (24%), Positives = 158/346 (45%), Gaps = 22/346 (6%)

Query: 13  LLQEPIAKLFWRYTIPTIASMLVTGVYVTIDGIFVGHYLGETGLAGMMLAYPVGAILYAI 72
           L + PIA+    + +P + S ++  +  +++ +++GH+LGE+ L+ +  A  +  +L   
Sbjct: 11  LTEGPIARTLLLFALPIMGSTVLQSLNASVNAMWIGHFLGESALSAVSNASLIVFLLLTA 70

Query: 73  GAMIGMGSAALVSINLGQGNVAKARKLLGNAFSLCLLAGAFFALVGGVFSRDILIALGAE 132
              + M S  LV  +LG  N+ +A++++G   S  +      A++G   +  +L  LG  
Sbjct: 71  VFGVSMASTILVGQSLGARNMVEAKRVVGTGVSFFVALSTLVAVLGYFNTAWMLQQLGTP 130

Query: 133 GEILENANEYLFWYFALCHFPIISMAFTTLLRNDGRPSMVTFVLILGGVLNTFLDWLFIV 192
            + +  A  YL   F               LR  G        + +  +L+  L+ LF+ 
Sbjct: 131 ADAMPYAVPYLRMVFVAMPSMYFYNFLMMTLRGAGDARTPFMFMAMSVLLDIALNPLFMF 190

Query: 193 ----VFPFGLAGAAIATMLSQAVTGLLCLQHFFGARTQLKINLEQM-KLKLDNCINIARV 247
               V   G AG+  AT++SQ+V     L   +  +  L++   ++  LK D  I  A V
Sbjct: 191 GWGPVPAMGTAGSGFATLISQSVALAALLTTLYRRKHFLRLTGHELGYLKPDPAILRALV 250

Query: 248 --GLPSFLMNLYLS----IVLTLHNTAFLWVGGPLHVAAYGVVSYTEAFFYLIFEGIALG 301
             GLP  L  + +S    +++ L N       G    AAYG V  T+ + Y+    +A+G
Sbjct: 251 FKGLPMGLQMIVISSSAMLMMRLVNGY-----GSHTTAAYGAV--TQLWTYVQMPAMAIG 303

Query: 302 --TQPIYSFNAGAGRFDRVKQ--ARNIAFSMTLLTAALGLVLIYSR 343
                + + N GA  +DRV +     +A++  L  + + L+ +++R
Sbjct: 304 AAVSSMAAQNVGARLWDRVHRITRAGVAYNFLLSGSLIALIYVFNR 349