Pairwise Alignments

Query, 514 a.a., transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 475 a.a., major facilitator transporter (RefSeq) from Shewanella loihica PV-4

 Score =  126 bits (317), Expect = 2e-33
 Identities = 119/516 (23%), Positives = 202/516 (39%), Gaps = 126/516 (24%)

Query: 30  IFWLVGGMELVERIAYYGVKASAGLYAKAPESAGGLGISLSDYGIIISLWAIMQTFVPVF 89
           IFW+  G+EL+ER AYYGV     LY         LG S  +   +   ++    F+P F
Sbjct: 22  IFWIANGVELLERAAYYGVFIVITLYLSRI-----LGFSDVEAAWLAGSFSAGLYFLPTF 76

Query: 90  TGGISDRVGYKETIFGSTIIKIMGYLTMAFFPTF------------------------WG 125
           +G ++D++G++  +  +  +  +GY ++A FP                          W 
Sbjct: 77  SGALADKIGFRGALLLAFGLLTIGYASLAIFPALIESQGLVEYGKETIYHGLKEADIRWA 136

Query: 126 FLSGSLLLAIGTGIFKPGIQGTLVLSTNRNNTSMAWGIFYQVVNIGGFLGPLVAVHMRQL 185
            +   +++ IG    K  I GT+ LST     +  + IFY +VNIG F G  V   +R+ 
Sbjct: 137 IVPILIVIMIGGSFIKAVITGTVALSTTAETRAKGFSIFYMMVNIGAFSGKTVVKPLRES 196

Query: 186 SWD----NVFYACAAIISLNFLFLLTYTEPGKAERLARNQQIKSGDIKQETLWRDAWHEL 241
             D    N+ Y  A +  + F  ++ + +  +  R  ++     G+I     W+     L
Sbjct: 197 MGDLGLINLNYFAATMTLIAFFSIMLFFKSTEENRSGKS----LGEI-----WQALLKVL 247

Query: 242 KKPIVIYYMLVFSGFWFLFNSLFDVLPIHISEWVDTSVIVTSLFGSEGTSNGILQFWLGL 301
               +I  +L+ +GFW + + L+  +P ++                EG+S          
Sbjct: 248 SNGRLIALILIITGFWMVQHQLYATMPKYVLR-----------MAGEGSS---------- 286

Query: 302 NNEGTKVMPEGMLNLNAGLIMTSCFLVAALTAKYRITTVMLIGCLLSILAFV-------- 353
                   P    N+N  ++      V  + AK    T M +G  +  ++ +        
Sbjct: 287 --------PSWYANVNPLVVFLCVSFVTGMMAKRSALTSMTVGMFIMPVSALLMASGNMF 338

Query: 354 -----FIGAFHAAWFIVFAIAMFSIGEMMISPKKNEFMGNIAPEGKKAMYLGFVMLPQGI 408
                 +G    A  ++  I    + E  ISP+  E+    AP+G++ +YLGF  L   I
Sbjct: 339 AGSETILGMHPIAAMMIIGIVFQGLAECFISPRFLEYFSLQAPKGEEGLYLGFSHLHSFI 398

Query: 409 ----GWGLEGYFGPKLYEIYASKELFSRDLLLERGMSPTDVSAIPQGEAFTTLVSFTGEN 464
               G+GL GY    L E Y                        P    +    ++   +
Sbjct: 399 SSLLGFGLSGY----LLEAYC-----------------------PDPRVYNDHAAWVEAS 431

Query: 465 AHDLTQLLYNSHNIGMAWYIIAAIGTISAVGIYFYG 500
           AH        +H I   WY+ AAI ++SAV +  YG
Sbjct: 432 AH--------AHYI---WYVFAAIASVSAVSLIIYG 456