Pairwise Alignments

Query, 514 a.a., transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 462 a.a., putative permease (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  103 bits (258), Expect = 1e-26
 Identities = 111/525 (21%), Positives = 203/525 (38%), Gaps = 121/525 (23%)

Query: 31  FWLVGGMELVERIAYYGVKASAGLYAKAPESAGGLGISLSDYGIIISLWAIMQTFVPVFT 90
           FW+   +EL ER+AYY V     +Y  +      LG +  +  +I  L++     +P+F+
Sbjct: 16  FWVSNTVELFERMAYYAVFIVLTIYLSSI-----LGFNDFEASMISGLFSGGLYLLPIFS 70

Query: 91  GGISDRVGYKETIFGSTIIKIMGYLTMAFFPTF------------------------WGF 126
           G  +D++G+++++  +  +  +GYL +  FPT                         W  
Sbjct: 71  GAYADKIGFRKSMIIAFSLLSIGYLGLGVFPTLLEAAGLVSYGATTRFNGLPDSSSRWII 130

Query: 127 LSGSLLLAIGTGIFKPGIQGTLVLSTNRNNTSMAWGIFYQVVNIGGFLGPLVAVHMRQLS 186
           +    +L IG    K  I  ++   T     +  + IFY +VN+G F G  +   +R + 
Sbjct: 131 VPILFILMIGGSFIKSIISASVAKETTEATRARGYSIFYMMVNVGAFTGKTIIDPLRNVI 190

Query: 187 WD------NVFYACAAIISLNFLFLLTYTEPGKAERLARNQQIKSGDIKQETLWRDAWHE 240
            +      N F     +I+L  + LL Y     A      ++I  G ++  T WR     
Sbjct: 191 GEQAYIYINYFSGAMTVIALLAVILL-YKSTHTAGEGKSLREIGQGFMRIMTNWR----- 244

Query: 241 LKKPIVIYYMLVFSGFWFLFNSLFDVLPIHISEWVDTSVIVTSLFGSEGTSNGILQFWLG 300
                ++  +L+ +GFW +   L+  +P ++                             
Sbjct: 245 -----LLILILIVTGFWMVQQQLYATMPKYV----------------------------- 270

Query: 301 LNNEGTKVMPEGMLNLNAGLIMTSCFLVAALTAKYRITTVMLIGCLLSILAFVFI----- 355
           +   G    P  + N+N  +++     +  L AK    T M +G  L  ++ + +     
Sbjct: 271 IRLAGETAKPGWIANVNPFVVVCCVSFITRLMAKRSAITSMNVGMFLIPVSALLMACGNI 330

Query: 356 -------GAFHAAWFIVFAIAMFSIGEMMISPKKNEFMGNIAPEGKKAMYLGFVMLPQGI 408
                  G  +    +V  I + ++ E  ISP+  E+    AP+G++ MYLGF  L    
Sbjct: 331 LGNDIISGMSNITLMMVAGIVVQALAECFISPRYLEYFSLQAPKGEEGMYLGFSHLHS-- 388

Query: 409 GWGLEGYFGPKLYEIYASKELFSRDLLLERGMSPTDVSAIPQGEAFTTLVSFTGENAHDL 468
              L   FG  L  I  +K                     P    F T  ++   +A   
Sbjct: 389 --FLSSIFGFGLAGILLTK-------------------YCPDPALFETRAAWEAASA--- 424

Query: 469 TQLLYNSHNIGMAWYIIAAIGTISAVGIYFYGKWLLTLQRAQQAA 513
                N+H I   WY  AAIG I+A+ +  + K   ++ + ++++
Sbjct: 425 -----NAHYI---WYYFAAIGLIAAIALLLFAKITESIDKKKKSS 461