Pairwise Alignments

Query, 549 a.a., Malate synthase (EC 2.3.3.9) (from data) from Shewanella oneidensis MR-1

Subject, 710 a.a., malate synthase GlcB from Phaeobacter inhibens DSM 17395

 Score = 50.1 bits (118), Expect = 3e-10
 Identities = 63/278 (22%), Positives = 104/278 (37%), Gaps = 40/278 (14%)

Query: 224 YFYIPKLESHIEARWWAKVFAFVEERFCLQAGTIKCTCLIETLPAVFEMDEILYELRSNI 283
           Y   PK+    E  +  ++F  VE+   L   T+K   + E       +   +   +  +
Sbjct: 379 YVVKPKMHGPEEVAFTDRIFTHVEDALGLPRHTVKIGIMDEERRTSVNLKSCIRAAKHRV 438

Query: 284 VALNCGRWDYIFSYIKTLKRHGDRVLPDRQAVTMDTPFLSAYSRLLIK---TCHKRGALA 340
             +N G  D     I T    G  +   R+     TP++++Y    +     C  +G   
Sbjct: 439 AFINTGFLDRTGDEIHTSMEAGAMM---RKGEMKSTPWIASYEDRNVDIGLACGLKGRAQ 495

Query: 341 MGGMAAFIPAKDPAQNEAVLQRVRKDKELEARNGHDGT-----WVAHPGLADTAMGIFNE 395
           +G     +P              R  + LEA+ GH  +     WV  P  A      ++ 
Sbjct: 496 IGKGMWAMPD-------------RMGEMLEAKIGHPKSGATCAWVPSPTAATLHATHYHR 542

Query: 396 YIGQDHQNQLHI-----TRD--VDAPILAAELLKTCDGERTEQGMRLNIRIALQYLEAWI 448
               + Q+QL       T D  +  P++  E L   +     Q +  N +  L Y+  W+
Sbjct: 543 VNVHEVQDQLKAGGARGTLDDLLTIPVMQGENLSDAE---IAQEIENNAQGILGYVVRWV 599

Query: 449 S-GNGCVPI-----YGLMEDAATAEISRASIWQWIQHG 480
             G GC  +      GLMED AT  IS  ++  W+ HG
Sbjct: 600 DQGVGCSKVPDIHNVGLMEDRATCRISSQALANWLHHG 637