Pairwise Alignments

Query, 684 a.a., type I restriction-modification system, M subunit, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 821 a.a., putative type I restriction-modification system, M subunit from Phaeobacter inhibens DSM 17395

 Score = 69.3 bits (168), Expect = 7e-16
 Identities = 72/330 (21%), Positives = 133/330 (40%), Gaps = 61/330 (18%)

Query: 236 RDREFWASPTEQFD---DEGRKKIRARINPLFEKVKKAYPEIFSGNEEII---------L 283
           R   FW  P  +F    DE  + I  ++N     V+     +    + I          +
Sbjct: 78  RSGTFWVPPQSRFGHLVDEAHENIGDKLNKALGGVESENIALEGVLDHIDFTRKVGQSKI 137

Query: 284 SDRALAFMVSELAKYDFTRTEM---DAKGAAYQEVVG---DNLRGDRGQYFTPRGAIKLI 337
           SD+ L  +++   +      +    D  GAAY+ ++G   D+     G+++TPR  ++++
Sbjct: 138 SDQKLRQLINHFGEIRLRNEDFEFPDLLGAAYEYLIGEFADSAGKKGGEFYTPRSVVRMM 197

Query: 338 VEMMAPQPHEKVLDPSCGTGGFLEQTLSFINRKLCEEEEVKLGAETTEEFISIQQQIKKF 397
           V ++ P     + DP CG+GG L     +I      +E  + G                 
Sbjct: 198 VRLLKPTLEHDIYDPCCGSGGMLIAAKDYI------DEHGQDGRRA-------------- 237

Query: 398 AENNLFGCDFDPFLCRASQMNVVMASNAMANIYHMNSLEYPHGHLKGVEPAKSKIPVGDS 457
              NLFG +    +   ++MN+++     A++ + ++L  P  H++              
Sbjct: 238 ---NLFGQENSGTVWSIAKMNMLLHGINSADLRNEDTLGEPQ-HVE-------------- 279

Query: 458 SGKDGSIDVILTNPPFGSDIPVTDKQILEQYDLAYVWERTENGGFRKTERRKDAVSPEIL 517
            G+    D ILTNPPF  +    DK    +    Y W+      F   E    +   +++
Sbjct: 280 DGELRRFDRILTNPPFSINWGSKDKDRSGE----YTWQPKFRERFFH-EVPLGSKKADLM 334

Query: 518 FIERCVQWLKQGGRMGIVLPDGILGNPGDE 547
           F++  +   + GG +  V+P G+L   GDE
Sbjct: 335 FLQHMLAVSRDGGMIATVMPHGVLFRGGDE 364