Pairwise Alignments

Query, 399 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 381 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  314 bits (805), Expect = 2e-90
 Identities = 169/365 (46%), Positives = 238/365 (65%), Gaps = 7/365 (1%)

Query: 22  RNANLDAIRGLAVLGIFFMNIYFMGISFYGYAPHQIPLLWDQILQTFSNFFIEGRFISLF 81
           RN N+D++RGLAVLGIFF+NI FMG S  GY P       D  L+ FS   +EGRFI LF
Sbjct: 8   RNPNIDSVRGLAVLGIFFINILFMGNSLEGYIPTIPAAASDVPLEVFSRLLLEGRFIGLF 67

Query: 82  SMLFGVGLYIQYQKFTAKGLAAYPLLRSRLKWLIIFGLIHGILIWSGDILLTYGISGFLA 141
           +MLFGVGL IQYQ+F       +P+ R RLK L++FGL+HGI IW GD+LL+YG+S  +A
Sbjct: 68  TMLFGVGLVIQYQRFGQ----VFPIKR-RLKILMLFGLLHGIFIWPGDVLLSYGLSAMVA 122

Query: 142 LCYRDITIAEQKRKANIFIFMSLVITCLLALS-GSDELFTRESAFFAEQYSAWTSSYPNQ 200
           + Y D  +    ++A  F+  S ++  LL  +  ++ L +R S  +    + W   Y  Q
Sbjct: 123 IRYLDAPLDHIHKRALQFLGFSAIVMLLLTQALPTEPLPSRLSPEYQASLAPWIGPYLGQ 182

Query: 201 LLLHL-IQVGYTALALPFTLMWFTAGLMLLGMALYRQGIFEQGFNRNTLLKLALASLVLS 259
           +L HL + +  T + LP  L+W+  G+MLLGM LYR   F +G      ++L L +L+L 
Sbjct: 183 VLQHLAMMLMMTLVMLPIALLWYILGMMLLGMYLYRSHFFNEGLTDAARIRLLLLALLLG 242

Query: 260 TMDTLLGLTQNPMLVMFSDIIVMLSAIPMALIYIHILVSICQNRSTVLKPLQNVGKLAFS 319
            +D  L  +++  LV  ++I V+ SAIP++++Y  +++ +C+   TVLKPLQNVGKLA S
Sbjct: 243 AVDLTLYFSESRALVNLAEITVIFSAIPVSVLYADLIIRLCRGSETVLKPLQNVGKLALS 302

Query: 320 LYILQSIVGVLVFRHLAPELLLSLDRWGYMAIALVYSVVQLLLASLYLRYFKQGPLEKLW 379
           LYILQS++G+  FR+L P+ L S DR  Y+  AL ++  Q+LLAS YLR FKQGPLE+LW
Sbjct: 303 LYILQSLLGIACFRYLFPDWLQSFDRIHYLITALTWAACQILLASWYLRCFKQGPLERLW 362

Query: 380 RHLAF 384
           R+LAF
Sbjct: 363 RYLAF 367