Pairwise Alignments

Query, 399 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 386 a.a., DUF418 family protein from Pantoea sp. MT58

 Score =  106 bits (265), Expect = 1e-27
 Identities = 96/374 (25%), Positives = 165/374 (44%), Gaps = 30/374 (8%)

Query: 26  LDAIRGLAVLGIFFMNIYFMGISFYGY---APHQIPLLWDQILQTFSNFFIEGRFISLFS 82
           LD IRG A+LGI  +NI   G+    Y   A      L D      S+ F + +F++LF+
Sbjct: 7   LDFIRGCAILGILLLNIVGFGLPSAAYLNPAWQGSVTLSDAWTWALSDVFAQLKFLTLFA 66

Query: 83  MLFGVGLYIQYQKFTAKGLAAYPLLRSRLKWLIIFGLIHGILIWSGDILLTYGISGFLA- 141
           +LFG GL +Q  + +         L +RL  L++ G +HG+ +W GDILL YGI G +  
Sbjct: 67  LLFGAGLQMQLPRGSR-------WLTARLSLLVLIGFVHGVFLWEGDILLDYGIIGLVVW 119

Query: 142 LCYRDITIAEQKRKANIFIFM-----SLVITCLLALSGSDELFTRESAFFAEQYSAWTSS 196
              RD+          I +++      LV   + +   ++      +    EQ+      
Sbjct: 120 RVLRDVPSTRSLMNTGILLYLVGCGVLLVFGSISSPEPTNSWLPGAAELQYEQFWKLAGG 179

Query: 197 YPN-QLLLHLIQVGYTALALPFTLMWFTAGLMLLGMALYRQGIFEQGFNRNTLLKLALAS 255
           +   Q  L  +  G  ALA  +   W  AGLM++G AL R G     F      + A   
Sbjct: 180 WDAIQNRLDHLSSGLMALAAQYG--WQLAGLMMIGGALLRSGWLIGEFPARHYRQAAALL 237

Query: 256 LVLSTMDTLLGLTQNPML-------VMFSDIIVMLSAIPMALIYIHILVSICQN--RSTV 306
           L++     + G+    +L         +      L++  ++L Y  + ++      R  +
Sbjct: 238 LIIGFSIAVAGVAAQWLLHWEFRWTAFYLQAPRDLASPLISLGYTALCLAYWPQIARWRI 297

Query: 307 LKPLQNVGKLAFSLYILQSIVGVLVFRHLAPELLLSLDRWGYMAIALVYSVVQLLLASLY 366
              +Q VG++A + Y+LQ+++   +F        +   R   + +     ++ +L + ++
Sbjct: 298 SYAIQCVGRMALTNYLLQTVICTTLFYRFG--FYMHFTRLELVLMVPAVWLINILFSLIW 355

Query: 367 LRYFKQGPLEKLWR 380
           L +F QGPLE LWR
Sbjct: 356 LHFFAQGPLEWLWR 369