Pairwise Alignments

Query, 325 a.a., iron-sulfur cluster-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 356 a.a., phenylacetic acid degradation protein from Herbaspirillum seropedicae SmR1

 Score =  126 bits (316), Expect = 9e-34
 Identities = 94/330 (28%), Positives = 153/330 (46%), Gaps = 24/330 (7%)

Query: 3   FDYKPGQFITFVLEINGEQACRSYTLSSTPSRPYSLMVTIKRVDGGLVSNYLIDHLQPGQ 62
           F Y+ GQ +T   EINGE   RSY++ S       L V IKR  GGL SN+  +   PGQ
Sbjct: 34  FSYQQGQHLTLRSEINGEDLRRSYSICSAVQER-QLRVAIKRAPGGLFSNWANESFVPGQ 92

Query: 63  TVRVLPPTGQFNLFDIPANK--YLFLSAGCGITPMYSMSRYLTDTQINADIAVVHSARTQ 120
            + V+PP G FN+     N+  YL  +AG GITPM S+ +    ++ ++   +V++ R  
Sbjct: 93  RIDVMPPMGHFNVPLEAGNRKHYLAFAAGSGITPMMSIIKTTLLSEPHSHFTLVYANRAS 152

Query: 121 ADIIFKNTLETMAARHAS-FKLCYLVEGVTTDTVWHTEEAFHYVGRLSAQNLLSLVPDFA 179
           + +IFK  L  +   +   F + Y++     D      E F+  GR+      +    + 
Sbjct: 153 SSVIFKEELTDLKDAYLERFNVVYVMSREQQDV-----ELFN--GRIDRAKCDAFFASWI 205

Query: 180 ER----IVFLCGPELYMQAVKTILTELNFDMNKLYHESFATAVKEAQSHVKQAEIQSETP 235
           +       FLCGPE  +QAV   L        ++  E FA +        +    + E  
Sbjct: 206 DLKDVDAAFLCGPEEMVQAVAASLQAHGLPKTQIKTELFAASTPPRAHAARTVVGKQECE 265

Query: 236 TTSSTGFMLSIGDKKHLLTAEQTLLDGIEA---EGLPIIAACRSGVCGACKCKVLQGETE 292
            T      + +    ++ T ++     +EA    G+ +  +C+ GVC  C+CKV++G+ +
Sbjct: 266 VT------VIVDGYHNVFTMDKEKESVLEAGLKHGIDLRYSCKGGVCATCRCKVVEGKVD 319

Query: 293 STSYMTLTPTDIEAGYVLACSTRLKSDVTL 322
             +   L   +I  G+VL+C +   SD  L
Sbjct: 320 MDANYALEDYEIARGFVLSCQSFPVSDKLL 349