Pairwise Alignments

Query, 457 a.a., signal recognition particle protein Ffh (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 458 a.a., signal recognition particle subunit FFH/SRP54 (srp54) from Pseudomonas syringae pv. syringae B728a

 Score =  647 bits (1669), Expect = 0.0
 Identities = 327/453 (72%), Positives = 389/453 (85%), Gaps = 2/453 (0%)

Query: 1   MFENLTDRLSRTLKNISGRGRLTEENVKETLREVRMALLEADVALPVVREFVNNVKERAV 60
           MFENLTDRLS+TL++++G+ +L E+N+K+TLREVRMALLEADVALPVV++FVNNVKERAV
Sbjct: 1   MFENLTDRLSQTLRHVTGKAKLNEDNIKDTLREVRMALLEADVALPVVKDFVNNVKERAV 60

Query: 61  GQEVAKSLSPGQAFIKIVQSELEKSMGEANQALDLATQPPAVVMMAGLQGAGKTTSVAKL 120
           G EV++SL+PGQAF+KIVQ+ELE  MG AN+ L L   PPAV++MAGLQGAGKTT+  KL
Sbjct: 61  GTEVSRSLTPGQAFVKIVQAELESLMGAANEDLVLNVTPPAVILMAGLQGAGKTTTAGKL 120

Query: 121 GKLLRTRHKKSVLVVSADVYRPAAIKQLETLATEVDVEFFPSDVSQKPIDIAKAAIAHAK 180
            + L+ R KK+V+VVS DVYRPAAIKQLETLA ++ V FF SD+SQKP+DIA+AAI  A+
Sbjct: 121 ARFLKERKKKTVMVVSVDVYRPAAIKQLETLANDIGVTFFASDISQKPVDIAQAAIKEAR 180

Query: 181 LKFIDVVILDTAGRLHVDEAMMDEIKALHAALKPIETLFVVDAMTGQDAANTAKAFNEAL 240
           LKFIDVVI+DTAGRLHVD  MM EI+ALHAA+KP ETLFVVDAMTGQDAANTAKAF +AL
Sbjct: 181 LKFIDVVIVDTAGRLHVDVEMMGEIQALHAAVKPAETLFVVDAMTGQDAANTAKAFGDAL 240

Query: 241 PLTGVILTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDV 300
           PLTGVILTKVDGDARGGAALS+R ITGKPIKF+G+GEK++ALEPFHPDRIASRILGMGDV
Sbjct: 241 PLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSEALEPFHPDRIASRILGMGDV 300

Query: 301 LSLIEEVERGVDKEKAMKLASKVKQGGSFDLEDFREQLQQMKNMGGMMSMIEKLPGVGQL 360
           LSLIE+ E+ +DK+KA KLA K+K+G  FDLEDFR+QLQQMKNMGG+  +++KLP +G +
Sbjct: 301 LSLIEQAEQTLDKDKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPSIGGV 360

Query: 361 PPDALAQIQDG--KMTRQMEAIINSMTAKERKNPDLIKGSRKRRIAAGSGTEIQDVNRLL 418
               +   Q    K  +QMEAIINSMT  ER++PDL+ GSRKRRIA GSGT++QD+ RL+
Sbjct: 361 NLSQMGNAQGAAEKQFKQMEAIINSMTPAERRDPDLVSGSRKRRIAMGSGTQVQDIGRLI 420

Query: 419 KQFTQMQKMMKKMSAKGGMQKMMRGMRGMMPGG 451
           KQ  QMQKMMKK SAKGGM KMMRGM GM PGG
Sbjct: 421 KQHKQMQKMMKKFSAKGGMAKMMRGMGGMFPGG 453