Pairwise Alignments

Query, 457 a.a., signal recognition particle protein Ffh (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 451 a.a., signal recognition particle protein from Dechlorosoma suillum PS

 Score =  565 bits (1456), Expect = e-165
 Identities = 285/453 (62%), Positives = 359/453 (79%), Gaps = 7/453 (1%)

Query: 1   MFENLTDRLSRTLKNISGRGRLTEENVKETLREVRMALLEADVALPVVREFVNNVKERAV 60
           M +NLT RL+  +K + G  RLTE N+ + LREVR+ALLEADVALPV+++F+  VKE+A+
Sbjct: 1   MLDNLTQRLAGVMKTLRGEARLTESNISDALREVRLALLEADVALPVIKDFIAAVKEKAL 60

Query: 61  GQEVAKSLSPGQAFIKIVQSELEKSMGEANQALDLATQPPAVVMMAGLQGAGKTTSVAKL 120
           G+EV  SL+PGQA I +V  E+ + MG AN AL+LATQPPAV++MAGLQGAGKTT+V KL
Sbjct: 61  GEEVIGSLTPGQALIGVVHKEMTQLMGGANAALNLATQPPAVILMAGLQGAGKTTTVGKL 120

Query: 121 GKLLRTRHKKSVLVVSADVYRPAAIKQLETLATEVDVEFFPSDVSQKPIDIAKAAIAHAK 180
            KLL+   KK VLVVS DVYRPAAI+QL+T+A +  V+FFPS   +KP  IA AAI  A+
Sbjct: 121 AKLLKETQKKKVLVVSCDVYRPAAIEQLKTVAAQACVDFFPSSTEEKPEAIALAAIDWAR 180

Query: 181 LKFIDVVILDTAGRLHVDEAMMDEIKALHAALKPIETLFVVDAMTGQDAANTAKAFNEAL 240
             + DV+++DTAGRL +DEAMM EIK LHAA+KP+ETLFVVDAM GQDA NTA++FNEAL
Sbjct: 181 KHYHDVLLVDTAGRLAIDEAMMAEIKQLHAAIKPVETLFVVDAMLGQDAVNTARSFNEAL 240

Query: 241 PLTGVILTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDV 300
           PLTGV+LTK+DGDARGGAALS+RH+TGKP+KF+GVGEK   LE FHP+R+ASR+LGMGD+
Sbjct: 241 PLTGVVLTKLDGDARGGAALSVRHVTGKPVKFVGVGEKLSGLEAFHPERMASRVLGMGDI 300

Query: 301 LSLIEEVERGVDKEKAMKLASKVKQGGSFDLEDFREQLQQMKNMGGMMSMIEKLPGVGQL 360
           LSL+EE  +GVD+EKA+ +A K+K G  FDL DF++Q+ QM+NMGGM ++++KLP     
Sbjct: 301 LSLVEEARKGVDEEKALAMAKKLKSGKGFDLNDFKDQIAQMRNMGGMAALMDKLPAQF-- 358

Query: 361 PPDALAQIQDG---KMTRQMEAIINSMTAKERKNPDLIKGSRKRRIAAGSGTEIQDVNRL 417
              A  Q+Q G   K  R++E IINSMT  ER  P+LIK SRKRRIA G+G ++Q+VNRL
Sbjct: 359 -AQAAGQLQGGAEDKAVRRIEGIINSMTPAERAKPELIKASRKRRIATGAGVQVQEVNRL 417

Query: 418 LKQFTQMQKMMKKMSAKGGMQKMMRGMRGMMPG 450
           L QF Q QKMMK   AKGG+ K+MRGM+GMMPG
Sbjct: 418 LNQFEQTQKMMKSF-AKGGLSKLMRGMKGMMPG 449