Pairwise Alignments

Query, 457 a.a., signal recognition particle protein Ffh (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 471 a.a., signal recognition particle protein from Ralstonia sp. UNC404CL21Col

 Score =  551 bits (1419), Expect = e-161
 Identities = 295/473 (62%), Positives = 350/473 (73%), Gaps = 18/473 (3%)

Query: 1   MFENLTDRLSRTLKNISGRGRLTEENVKETLREVRMALLEADVALPVVREFVNNVKERAV 60
           M +NLT RL+R +K + G  RLTE N  E LREVRMALLEADVALPVVREF+  VKE+A+
Sbjct: 1   MLDNLTQRLARVVKTMRGEARLTEANTAEMLREVRMALLEADVALPVVREFIARVKEKAL 60

Query: 61  GQEVAKSLSPGQAFIKIVQSEL--------------EKSMGEANQALDLATQPPAVVMMA 106
           G++V  SLSPGQA + IVQ EL                 MG     L+L   PPA+++MA
Sbjct: 61  GEDVITSLSPGQALVGIVQRELTAIIGGQEALEGVGSNIMGGRAAELNLNVTPPAIILMA 120

Query: 107 GLQGAGKTTSVAKLGKLLRTRHKKSVLVVSADVYRPAAIKQLETLATEVDVEFFPSDVSQ 166
           GLQGAGKTT+V KL K L+   KK VL VS DVYRPAAI QL+T++ +V  +FFPS   Q
Sbjct: 121 GLQGAGKTTTVGKLAKWLKENKKKKVLTVSCDVYRPAAIAQLKTVSEQVGADFFPSQPDQ 180

Query: 167 KPIDIAKAAIAHAKLKFIDVVILDTAGRLHVDEAMMDEIKALHAALKPIETLFVVDAMTG 226
           KP+DIA AA+  AK  + DV+I+DTAGRL +DEAMM EI ALHA LKP ETLFVVDAM G
Sbjct: 181 KPVDIAAAALDWAKKHYHDVLIVDTAGRLGIDEAMMQEIAALHARLKPAETLFVVDAMLG 240

Query: 227 QDAANTAKAFNEALPLTGVILTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFH 286
           QDA NTAKAFN+ LPLTGV+LTK+DGDARGGAALS+RHITGKPIKF+GV EK D LEPF+
Sbjct: 241 QDAVNTAKAFNDTLPLTGVVLTKLDGDARGGAALSVRHITGKPIKFVGVAEKLDGLEPFY 300

Query: 287 PDRIASRILGMGDVLSLIEEVERGVDKEKAMKLASKVKQGGSFDLEDFREQLQQMKNMGG 346
           PDR+A RILGMGD+L+L+EE +RGVD E+A KLA+K+K+ G FDLEDF+ Q+ QMK MGG
Sbjct: 301 PDRMAQRILGMGDILALVEEAQRGVDMEEAQKLAAKIKKTGGFDLEDFKAQIGQMKKMGG 360

Query: 347 MMSMIEKLPGVGQLPPDALAQIQDGKMTRQMEAIINSMTAKERKNPDLIKGSRKRRIAAG 406
           + S+++KLP             Q  K  R+ME IINSMTA ER  P+LIK SRKRRIAAG
Sbjct: 361 LGSLMDKLPAQLAQQAQGANMDQAEKQVRRMEGIINSMTAAERAKPELIKASRKRRIAAG 420

Query: 407 SGTEIQDVNRLLKQFTQMQKMMKKMSAKGGMQKMMRGMRGMMPGGMK--FPGR 457
           +G ++Q+VNRLL QF QMQ MMKK+   GGM KMMR M G M GGMK  F GR
Sbjct: 421 AGVQVQEVNRLLNQFEQMQGMMKKLKG-GGMMKMMRAMGG-MKGGMKGLFGGR 471