Pairwise Alignments

Query, 262 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 310 a.a., ABC transporter permease from Cupriavidus basilensis FW507-4G11

 Score = 90.5 bits (223), Expect = 4e-23
 Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 29/244 (11%)

Query: 41  AVVLHAAALSQAIFTTDGQNFSLTNVISLVNWIIAFTFTVMMFRLKV----IVVVPVVYA 96
           AV  H   L + IF  D   F     +S + W+    + +  F   +    ++VVPV   
Sbjct: 70  AVASHGLLLHETIFPADRMVFGFAFALSAMLWLGVGIYWIESFFFSLAGLGLIVVPVAML 129

Query: 97  CSVLSVALLWLLPPKFIIHFELYPEVLAHVVLSLMAYSALMIAALYAIQLAMIQNKLKKK 156
            S++ +A     P   I+ +   P    H +++ +AY    +AA +A  + + + +L   
Sbjct: 130 ASLMPLAF----PGAQILGYAARPLFKLHFIIANVAYGLFTLAAFHAFLMLLAERRLHG- 184

Query: 157 QLMLSPS-----------------IPPLMTVEKQLYHLVIIGVILLSLSLATGFIFLDDM 199
               SP                  +PPL+T+EK L+ L+  G +LL+L++ +G +F + +
Sbjct: 185 -FNRSPQAGKASEPAQWVGRWLDLLPPLLTLEKLLFRLIGAGFVLLTLTILSGLLFSEQL 243

Query: 200 F--ADGKGHKAILSIIAWFVYIAMLWQQYWVGCKIRTAVIYTLTGATLLSLAYFGARIVK 257
           F  A    HK + ++++W ++  +L  + + G + RTA+ + +    +L LAY G+R V 
Sbjct: 244 FGRAFRLDHKTVFALLSWAMFAGILAGRTFYGWRGRTALRWVIASFGILLLAYVGSRFVI 303

Query: 258 ELIL 261
           E+IL
Sbjct: 304 EVIL 307