Pairwise Alignments

Query, 423 a.a., hemolysin protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 413 a.a., Magnesium and cobalt efflux protein CorC from Pseudomonas fluorescens FW300-N2E2

 Score =  210 bits (534), Expect = 7e-59
 Identities = 142/417 (34%), Positives = 215/417 (51%), Gaps = 21/417 (5%)

Query: 1   MDAISTSALLIFLLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPD 60
           MD +  + L   L+VLIL+SA F+  E A   L   R    AS+      + L  L  P 
Sbjct: 1   MDTLPVAPLFAVLVVLILWSALFTAIEAAQQHLLAQRTASRASD------KPLATLTFP- 53

Query: 61  RLIGLILIGNNLVNILAASIATIIGMRLWGDLGVAIASGVLTLVVLVFGEVTPKTIAALN 120
             +  +++ N L   LA  I T++ +  W + G  +A    +  +LV  +  P+ +A   
Sbjct: 54  --LASLILCNTLCRTLAVVIGTLLAIFTWLENGPWVAWLGTSAALLVLADYLPRALATRQ 111

Query: 121 PERIAFPSSYLLIALSKIFAYVVTSVNFITTGILRLVGIKS--ISSSDALSKEELRTV-- 176
           PE +    + LL    KI       +N  +  +LR    K+  +  SD       R+   
Sbjct: 112 PEAVLALGNTLLGIPLKILYPFAWLLNSASQLLLRPFARKASIVQQSDDEMPAPPRSEHE 171

Query: 177 -VHEAGALIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYAINVNDDFKFINRQVIQSPHT 235
             H A  L P      +  I  L+ +TV DI+VPRS++  IN++D    I  Q+  +  T
Sbjct: 172 PEHGASRLHP------ISGIHALDNITVNDILVPRSEVDGINLDDPIGEIIEQLRLNRRT 225

Query: 236 RVLVYRDTIDDAVGFIHLRDALRLQSKEQFSKSSLLRAVKELYFIPEGTPLNVQLANFQH 295
           R+ V+   I+     ++ R    L +    ++ +LL A  E YF+PE TPL +QL NF  
Sbjct: 226 RLPVFHSDINQVEAVLNTRQIRHLLADASLTQEALLAASHEPYFVPESTPLQLQLLNFHK 285

Query: 296 NKERIGLVVDEYGDIQGLVTLEDILEEIVGDFTTSMLATPSEDINVQQDGSYLVNASITI 355
            + R+G+VVDEYG++ G+VTLEDILEEIVG+F  S  +  +  ++ Q DG  +++ + +I
Sbjct: 286 QQRRLGMVVDEYGEVLGIVTLEDILEEIVGEF-ESEHSLDNPHVHPQPDGRLMIDGAASI 344

Query: 356 RDLNKEMKWDFPTDGPKTLNGLILEYLEDIPSENTSLRLAGYPLEVIEVADNMVKTV 412
           R+LN+ + W  P DGPKTLNGL+ E LE IP     L++  Y LE+IE  DN V  V
Sbjct: 345 RELNRTLGWHLPCDGPKTLNGLVTEALETIPESPVCLKIGRYRLEIIETVDNRVSQV 401