Pairwise Alignments

Query, 423 a.a., hemolysin protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 415 a.a., CBS:Transporter-associated region from Pseudomonas syringae pv. syringae B728a

 Score =  228 bits (582), Expect = 2e-64
 Identities = 139/414 (33%), Positives = 213/414 (51%), Gaps = 13/414 (3%)

Query: 1   MDAISTSALLIFLLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPD 60
           MD +    LL  L +L+L++   +  E A          H      + A R  K    P+
Sbjct: 1   MDNLPLGPLLGVLALLLLWAGLLTAVEAA----------HHQVKAMRSASRPEKSAPLPE 50

Query: 61  RLIGL--ILIGNNLVNILAASIATIIGMRLWGDLGVAIASGVLTLVVLVFGEVTPKTIAA 118
               L  +++GN L+ +L + IAT+I    W   G  +A      ++LVF E  P+ +A 
Sbjct: 51  LAFNLNSLILGNTLIRVLISVIATLIAANYWLYNGPTVAWLATVSIMLVFAEYMPRRLAN 110

Query: 119 LNPERIAFPSSYLLIALSKIFAYVVTSVNFITTGILRLVGIKSISSSDALSKEELRTVVH 178
            +P       + +L    KI   +    N +   +LR    +++   D   +++ +    
Sbjct: 111 RHPVSTLLLGNGVLRIPMKIIWPLAYVFNVLAKTLLRPFLSRAVQQQDQDFEDDTQNTPR 170

Query: 179 EAGALIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYAINVNDDFKFINRQVIQSPHTRVL 238
              A        +L  I  L+ +TV DI++PR+++  +N++D  + I  ++I S HTR+ 
Sbjct: 171 NDAAQEYSPRASVLSGIRALDSITVNDILIPRNEVDGVNLDDPMEMIIERLIISRHTRLP 230

Query: 239 VYRDTIDDAVGFIHLRDALRLQSKEQFSKSSLLRAVKELYFIPEGTPLNVQLANFQHNKE 298
           VY + I+   G I+ RD   L  K   +K  LL    E YF+PE TPL +QL NF   + 
Sbjct: 231 VYHNDINQVQGVINTRDISHLLPKGTLTKEQLLAVCYEPYFVPESTPLQLQLLNFHKQQR 290

Query: 299 RIGLVVDEYGDIQGLVTLEDILEEIVGDFTTSMLATPSEDINVQQDGSYLVNASITIRDL 358
           R+G+VVDEYG++ G+VTLEDILEEIVG+F +      +  +  Q DG   V  + +IRDL
Sbjct: 291 RLGVVVDEYGEVLGIVTLEDILEEIVGEFESEQ-RLDNPHVKQQDDGRLEVEGAASIRDL 349

Query: 359 NKEMKWDFPTDGPKTLNGLILEYLEDIPSENTSLRLAGYPLEVIEVADNMVKTV 412
           NK + W  P+DGPKT+NGL+ E LE IP     L++  Y LE++E  DN VK V
Sbjct: 350 NKSLGWHLPSDGPKTVNGLVTEALETIPDAPVCLKIGPYRLEILETEDNRVKRV 403