Pairwise Alignments

Query, 423 a.a., hemolysin protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 427 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  688 bits (1775), Expect = 0.0
 Identities = 346/422 (81%), Positives = 392/422 (92%)

Query: 1   MDAISTSALLIFLLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPD 60
           M+AISTS L+I L VLI+ SAYFSGSETAMM+LNRYRLRHLA+NGHKGA RA++LLERPD
Sbjct: 1   MEAISTSVLVIILFVLIIISAYFSGSETAMMSLNRYRLRHLANNGHKGAKRAIRLLERPD 60

Query: 61  RLIGLILIGNNLVNILAASIATIIGMRLWGDLGVAIASGVLTLVVLVFGEVTPKTIAALN 120
           RLIGLILIGNNLVNILA++IATI+G+RL+GD+GVAIA+GVLTLVVLVF EVTPKT+AAL+
Sbjct: 61  RLIGLILIGNNLVNILASAIATILGIRLFGDVGVAIATGVLTLVVLVFAEVTPKTVAALH 120

Query: 121 PERIAFPSSYLLIALSKIFAYVVTSVNFITTGILRLVGIKSISSSDALSKEELRTVVHEA 180
           PERIAFPSS LL AL  + + +V  VNFIT+  LRL+GI+S+ + DALS+EELRTVVHEA
Sbjct: 121 PERIAFPSSVLLKALLVLLSPLVKIVNFITSTFLRLLGIRSVKADDALSQEELRTVVHEA 180

Query: 181 GALIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYAINVNDDFKFINRQVIQSPHTRVLVY 240
           GALIPQRHQEMLLSI+DLEKVTVEDIM+PRSD+YAINVNDDF  IN+QVIQSPHTRVL+Y
Sbjct: 181 GALIPQRHQEMLLSIMDLEKVTVEDIMIPRSDLYAINVNDDFSRINKQVIQSPHTRVLLY 240

Query: 241 RDTIDDAVGFIHLRDALRLQSKEQFSKSSLLRAVKELYFIPEGTPLNVQLANFQHNKERI 300
           RD IDDAVGF+HLRDALRLQSK+QFSKSSLLRAVKE+YFIPEGTPLNVQLANFQ NKERI
Sbjct: 241 RDNIDDAVGFVHLRDALRLQSKQQFSKSSLLRAVKEIYFIPEGTPLNVQLANFQQNKERI 300

Query: 301 GLVVDEYGDIQGLVTLEDILEEIVGDFTTSMLATPSEDINVQQDGSYLVNASITIRDLNK 360
           GLVVDEYGDIQGLVTLEDILEEIVGDFTTSM+ TPSEDIN QQDGS+L++A+I IRDLNK
Sbjct: 301 GLVVDEYGDIQGLVTLEDILEEIVGDFTTSMITTPSEDINQQQDGSFLIDATINIRDLNK 360

Query: 361 EMKWDFPTDGPKTLNGLILEYLEDIPSENTSLRLAGYPLEVIEVADNMVKTVRIIPQHYQ 420
           EM W FP DGPKTLNGLILEYLE+IP  NTS+RL+GYPLEV+EVADNMVKTVR++PQHY+
Sbjct: 361 EMDWHFPIDGPKTLNGLILEYLEEIPEPNTSMRLSGYPLEVVEVADNMVKTVRVMPQHYK 420

Query: 421 SP 422
           +P
Sbjct: 421 AP 422