Pairwise Alignments

Query, 423 a.a., hemolysin protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 441 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  126 bits (316), Expect = 1e-33
 Identities = 101/415 (24%), Positives = 197/415 (47%), Gaps = 27/415 (6%)

Query: 10  LIFLLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPDRLIGLILIG 69
           ++ +L+LI  S +FS SE A+    + RLR LA  G   A R L+L   P     ++ IG
Sbjct: 7   MLIILLLIGTSCFFSMSEIALAAARKIRLRQLADEGDPRAERVLQLQAHPGSFFTVVQIG 66

Query: 70  NNLVNILAASIATI-------IGMRLW------GDLGVAIASGVLTLVVLVFGEVTPKTI 116
            N V I+   +           G+  W        L   ++  ++T + ++  ++ PK  
Sbjct: 67  LNAVAIMGGIVGESAFTPYIRAGLESWVADPWLSQLSFVLSFIIVTSLFILIADLMPKRA 126

Query: 117 AALNPERIAFPSSYLLIALSKIFAYVVTSVNFITTGILRLVGIKSISSSDALSKEELRTV 176
           A   PER+A      +    ++   +V   N +   I RL+ I + + +D ++ +++  V
Sbjct: 127 AMAMPERVALVLVGPMTFCIRLLTPLVWVFNGLANAIFRLLQIPT-ARNDQVTSDDIYAV 185

Query: 177 VHEAGA---LIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYAINVNDDFKFINRQVIQSP 233
           + +AGA   ++ +  Q+M+ ++ +++ V V   M  R  +    + DD + I R++ + P
Sbjct: 186 M-DAGAEAGVLDKDEQQMIENVFEMQTVPVTAAMTARESLVYFLLQDDEEVIKRKIAEDP 244

Query: 234 HTRVLVYRDTIDDAVGFIHLRDAL-RLQSKEQFS-KSSLLRAVKELYFIPEGTPLNVQLA 291
           HT+ LV    +D   G +  ++ L R+ + +  + K S L  V     IP+   L+  + 
Sbjct: 245 HTKFLVCDGQLDTIKGVVDAKELLIRVINGQSITLKDSTL--VHNCLIIPDSLSLSESME 302

Query: 292 NFQHNKERIGLVVDEYGDIQGLVTLEDILEEIVGDFTTSMLATPSEDINVQQDGSYLVNA 351
            F++++    +V++EY  + G+VT  D+   ++G ++   L    E I  +   S+LV+ 
Sbjct: 303 YFKNHRADFAVVMNEYALVVGIVTTNDLQSAVMGAWS---LHESEEQIIARDKDSWLVDG 359

Query: 352 SITIRDLNKEMKWD-FP-TDGPKTLNGLILEYLEDIPSENTSLRLAGYPLEVIEV 404
              I D+ +    + FP +   +T+ G ++  L  IP     +   GY  EV+++
Sbjct: 360 VTPITDVMRAFGIEAFPQSQNYETIAGFMMFMLRKIPKRTDFVNFGGYKFEVVDI 414