Pairwise Alignments

Query, 175 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 180 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  231 bits (588), Expect = 7e-66
 Identities = 112/172 (65%), Positives = 140/172 (81%), Gaps = 4/172 (2%)

Query: 1   MKSAVEQLSTYKSVHLNPRNIQTHFIGIPLIIWSAFLLFATIRIPLGDADN----VNLGM 56
           MKSA+EQLSTYKSVHLNP NI+THF+GIPLIIWSAF++  TI   L    +    +N+ +
Sbjct: 1   MKSAIEQLSTYKSVHLNPTNIKTHFVGIPLIIWSAFVMLNTIPFSLYSFGSTGLELNVAV 60

Query: 57  ILAIGIMLYYLRLHAKLALGLALFLAPVIYTTELVAHSENAFGLAITVFIVGWIFQLIGH 116
           + A  +++YY  LHAKLALGL LF+ PV+YT+ LV+  E A+ +AI VF++GWIFQLIGH
Sbjct: 61  LFACAVLIYYFALHAKLALGLVLFILPVLYTSFLVSRMEQAWPIAIGVFVIGWIFQLIGH 120

Query: 117 RYEKAKPAFVDDLNQLLIGPFFLMAEVYFMLGLEKQLNAEITPIAIEKRRAL 168
           +YEKAKPAF+DDLNQLLIGPFFLMAE+YFMLGLE+ L+  ITP+A +KRRAL
Sbjct: 121 KYEKAKPAFIDDLNQLLIGPFFLMAELYFMLGLERDLDEAITPLARDKRRAL 172