Pairwise Alignments

Query, 175 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 179 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score = 97.8 bits (242), Expect = 9e-26
 Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 4/161 (2%)

Query: 1   MKSAVEQLSTYKSVHLNPRNIQTHFIGIPLIIWSAFLLFATIRIPLGDAD-NVNLGMILA 59
           M++  +QL+ Y + H + RNI THFIGIP+I+ +  +L +     +G     ++    L 
Sbjct: 1   MRTLTQQLTQYAAYHRDRRNIATHFIGIPMIVLALAVLLSRPAFAVGAWPLTLSPAWALF 60

Query: 60  IGIMLYYLRLHAKLALGLALFLAPVIYTTELVAHSENAFGLAITV--FIVGWIFQLIGH- 116
           +   LYYL L   L + +    A  +   +  A       LAI V  F+VGW+FQ +GH 
Sbjct: 61  VAATLYYLVLDVPLGVMMTFVSALCVAFGQWTATQSTFAWLAIGVGLFLVGWVFQFVGHV 120

Query: 117 RYEKAKPAFVDDLNQLLIGPFFLMAEVYFMLGLEKQLNAEI 157
            YE  KPAFVDD+  LLIGP F++AE  F  G    L A I
Sbjct: 121 AYEHRKPAFVDDVIGLLIGPLFVLAEALFGFGWRPALRAAI 161