Pairwise Alignments

Query, 245 a.a., pyridoxal phosphate biosynthetic protein PdxJ (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 253 a.a., pyridoxine 5'-phosphate synthase PdxJ from Phaeobacter inhibens DSM 17395

 Score =  243 bits (621), Expect = 2e-69
 Identities = 132/240 (55%), Positives = 163/240 (67%), Gaps = 3/240 (1%)

Query: 6   LGVNIDHIATLRQARGTSYPDPVHAAAVAEHAGADGITIHLREDRRHIIDRDVYLLAKTL 65
           LGVNIDH+AT+R ARG   PDPV AA +AE AGADGIT HLREDRRHI D D+  L   L
Sbjct: 13  LGVNIDHVATVRNARGGLAPDPVRAAKLAEEAGADGITAHLREDRRHITDADIDGLMAAL 72

Query: 66  KTRMNFECAVTEEMLNIACEVKPTYVCLVPEKRQEVTTEGGLDVAGQLDKITAAVSRLAA 125
              +NFE A TEEM  IA   KP  VC+VPEKR+E TTEGGL+VA + +K+   ++ L  
Sbjct: 73  SVPLNFEMAATEEMQKIALRHKPHAVCIVPEKREERTTEGGLEVAREENKLAHYIAPLRD 132

Query: 126 NGIQVSLFIDADKTQIDAAVASGAPLIEIHTGCYADAKTADEEAK---ELERIREMAKYA 182
            G +VS+FI AD+ QI+AA   GA +IE+HTG Y DA    + AK   EL  +REM+ +A
Sbjct: 133 AGCRVSIFIAADQRQIEAAHRIGAEVIELHTGAYCDAHAEGDFAKRDAELAALREMSSFA 192

Query: 183 HGKGLIVNAGHGLHYHNVKPIAAIPELYELNIGHAIVARAAIDGLATAVKDMKTLMLEGR 242
           H  GL V+AGHGL Y  V+PIAA PE+ ELNIGH ++  A   GL  A+ +M+ LM E R
Sbjct: 193 HSLGLEVHAGHGLTYDCVQPIAAFPEVRELNIGHFLIGEAIFRGLTPAIAEMRRLMDEVR 252