Pairwise Alignments

Query, 233 a.a., DNA repair protein RecO (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 241 a.a., DNA repair protein RecO from Vibrio cholerae E7946 ATCC 55056

 Score =  134 bits (336), Expect = 2e-36
 Identities = 91/227 (40%), Positives = 128/227 (56%), Gaps = 5/227 (2%)

Query: 1   MKRGYVLHHRPYRESSALVNLLVDGIGRVDAVARVGSGKRS-IKSILQPFQPLIFEFSGK 59
           ++R +VLH RPY ESS ++++  +  GRV  +A+   GKRS +K  LQPF PL+ ++SG 
Sbjct: 5   LQRCFVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGN 64

Query: 60  SELKNISQIEAAAPAVPLSGYSLYAGMYINELLMRTLSVQHNAEALFFIYHQALVGLA-A 118
             +K + Q E  +  +PLSG  LY+ MYINEL+ R L  +  +  LF  Y  AL  LA +
Sbjct: 65  GSMKTLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALTELAQS 124

Query: 119 QFCESKLRYLELALLRELG-AMPSLIRDTQGEPLIPEHCYQLVPELGFQFVLNSRAKHTY 177
              E  LR  ELALL  +G  +  L     GEP+ P+  Y+   + GF      R   T+
Sbjct: 125 TNPEPALRRFELALLAAMGYGVDFLHCAGTGEPVSPDMTYRYREQKGF-IASVRRDNLTF 183

Query: 178 QGAMLTALNDNQLL-QEQFLEAKRLMRSMLQPLLGNKPLVSRQLFIQ 223
            G  L A+++ +   +EQ   AKR  R  L+P LG KPL SR+LF Q
Sbjct: 184 LGNELIAISERRFTSKEQLQAAKRFTRLALKPYLGGKPLKSRELFRQ 230