Pairwise Alignments

Query, 339 a.a., GTP-binding protein Era (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 301 a.a., GTP-binding protein Era from Phaeobacter inhibens DSM 17395

 Score =  218 bits (554), Expect = 2e-61
 Identities = 120/294 (40%), Positives = 174/294 (59%), Gaps = 3/294 (1%)

Query: 43  TYCGMVAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIVFIDTPG 102
           T  G VA+IG PN GKSTLLNR++G K+SI + K QTTR RI G+  +G  QIVF+DTPG
Sbjct: 3   TRAGFVALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGESQIVFVDTPG 62

Query: 103 LHIEEQRAINRLMNRAAASSLADVSMVIFVVDGMTWTADD-EMVLSKLRRGGEERKTVLA 161
           L  + +R ++R M  AA    AD  +V+ +V+      +  E +L  L   GE RK  LA
Sbjct: 63  L-FQPRRRLDRAMVAAAWGGAADADVVVLMVEAHRGITEGVERILEGLENIGEGRKIALA 121

Query: 162 INKVDNIKDKEALFPYLEDVAKKYPFDEILPISASKGTNVKRILELAAQSLPENPFFFPE 221
           INK+D ++    L    +D+ ++Y F +   ISA KG  V  +    A+ LPE P+ +PE
Sbjct: 122 INKIDRVQSA-VLLGLTKDLNERYAFADTFMISAEKGHGVDHLRGWLAEQLPEGPWLYPE 180

Query: 222 DYVTDRSQRFMASEIVREKLMRFLGDELPYDATVEIEQFKMMENGVYQINALILVEREGQ 281
           D + D   R +A+E+ REKL   L  ELPY  TVE E ++  ++G  +I+ LI V R+G 
Sbjct: 181 DQIADLPMRMIAAEMTREKLTLRLHQELPYQLTVETENWEERKDGSAKIDQLIYVMRDGH 240

Query: 282 KRMVIGSKGERIRTIATQARLDMETLFDNKVFLEVWVKVKSGWADDERALRSLG 335
           K +V+G +GE I+ ++  AR ++E   D KV L + VKV+  W ++      +G
Sbjct: 241 KGIVLGKRGETIKAVSQAARAELEEFLDRKVHLFLQVKVRPNWLEESERYSEMG 294