Pairwise Alignments

Query, 339 a.a., GTP-binding protein Era (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 307 a.a., GTP-binding protein Era (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  223 bits (569), Expect = 4e-63
 Identities = 118/301 (39%), Positives = 184/301 (61%), Gaps = 7/301 (2%)

Query: 45  CGMVAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIVFIDTPGLH 104
           CG VA++G PN GKSTLLN  LG K++I + + QTTR++I+GI ++   Q++F+DTPG+H
Sbjct: 8   CGWVALLGPPNAGKSTLLNSALGHKVAIVTPRAQTTRNQIVGILSEPDAQVIFMDTPGIH 67

Query: 105 IEEQRAINRLMNRAAASSLADVSMVIFVVDGMTWTADDEMVLSKLRR-----GGEERKTV 159
            +  R +N+++ + A  S+    +++ ++D   +    + + + ++        EER  +
Sbjct: 68  QQRGR-MNKILLQTAWQSMHSADVILVMLDADLYIKKPDFLENDVKPLMDAVAAEERPVI 126

Query: 160 LAINKVDNIKDKEALFPYLEDVAKKYPFDEILPISASKGTNVKRILELAAQSLPENPFFF 219
           +A+NKVD  +DK  + P   ++ K +P  E+ P+SA K   +  +++L    LP  P  +
Sbjct: 127 VAVNKVDLFRDKSKMLPLFIELQKLWPKAEVFPVSALKRDGLPELVKLVKSKLPVAPALY 186

Query: 220 PEDYVTDRSQRFMASEIVREKLMRFLGDELPYDATVEIEQFKMME-NGVYQINALILVER 278
           PED ++    RFMA+EIVREKL   L  ELPY   VEIE++   E   +  I+A+I V R
Sbjct: 187 PEDQLSTLPVRFMAAEIVREKLFLALRQELPYSVAVEIEKWDEEEGRDLVTIHAVIYVGR 246

Query: 279 EGQKRMVIGSKGERIRTIATQARLDMETLFDNKVFLEVWVKVKSGWADDERALRSLGYGD 338
              K MVIG  G  I+ I T+AR+D++ L + KV LE+WVKV+ GW +D   LRSLG  D
Sbjct: 247 PSHKSMVIGKAGATIKDIGTKARVDIQDLLEKKVHLELWVKVREGWTEDVGFLRSLGLAD 306

Query: 339 D 339
           +
Sbjct: 307 E 307