Pairwise Alignments

Query, 339 a.a., GTP-binding protein Era (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 308 a.a., GTP-binding protein Era (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  200 bits (508), Expect = 4e-56
 Identities = 115/295 (38%), Positives = 167/295 (56%), Gaps = 4/295 (1%)

Query: 43  TYCGMVAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIVFIDTPG 102
           T  G VA+IG PN GKSTL N ++G K+SI + K QTTR RI G+  +G  QIVF+DTPG
Sbjct: 8   TRAGFVALIGEPNAGKSTLTNAMVGAKVSIVTHKVQTTRARIRGVALEGAAQIVFVDTPG 67

Query: 103 LHIEEQRAINRLMNRAAASSLADVSMVIFVVDGMTWTADD-EMVLSKLRRGGEERKTV-L 160
           L    +R ++R M  AA    AD  +V+ +V+      D    +L  L    + ++ V L
Sbjct: 68  L-FRPRRRLDRAMVAAAWGGAADADIVVLMVEAHRGMTDGVRAILETLNERRDPKQIVAL 126

Query: 161 AINKVDNIKDKEALFPYLEDVAKKYPFDEILPISASKGTNVKRILELAAQSLPENPFFFP 220
           AINK+D +K  E L    +D+   YPF E   ISA KG  V  +      SLPE P+ +P
Sbjct: 127 AINKIDRVKS-EVLLKLTQDLNAAYPFAETFMISAEKGYGVADLRAWLGASLPEGPWMYP 185

Query: 221 EDYVTDRSQRFMASEIVREKLMRFLGDELPYDATVEIEQFKMMENGVYQINALILVEREG 280
           ED + D   R +A+EI REKL   L  ELPY  TVE E ++  ++G  +I+ ++ V R+G
Sbjct: 186 EDQIADVPLRMIAAEITREKLTLRLHQELPYQLTVETENWEERKDGSVRIDQVVYVMRDG 245

Query: 281 QKRMVIGSKGERIRTIATQARLDMETLFDNKVFLEVWVKVKSGWADDERALRSLG 335
            K +++G KGE  + ++  AR ++      KV L + VKV+  W +++     +G
Sbjct: 246 HKGILLGHKGETAKAVSKAAREELVEFLGRKVHLFLQVKVRPNWLEEKERFDEMG 300