Pairwise Alignments

Query, 468 a.a., glutamate synthase, small subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 472 a.a., Glutamate synthase [NADPH] small chain (EC 1.4.1.13) from Pseudomonas fluorescens FW300-N1B4

 Score =  650 bits (1678), Expect = 0.0
 Identities = 308/467 (65%), Positives = 375/467 (80%), Gaps = 1/467 (0%)

Query: 1   MSNDFQFIEVGRKDPTKHPAAKRSTQFIEIYQPFAQAQVSEQADRCLDCGNPYCEWKCPL 60
           ++NDFQFI+VGRKDP K    +R  +F+EIY+PF   Q ++QA RCL CGNPYCEWKCP+
Sbjct: 5   LNNDFQFIDVGRKDPKKKLLRQRKKEFVEIYEPFKPQQSADQAHRCLGCGNPYCEWKCPV 64

Query: 61  HNYIPNWLKLAQQGRIMEAADLVHETNTLPEICGRVCPQDRLCEGACTLNADFGAVTIGN 120
           HN+IPNWLKL  +G I++AA+L H+TNTLPE+CGRVCPQDRLCEGACTLN  FGAVTIG+
Sbjct: 65  HNFIPNWLKLVAEGNILQAAELSHQTNTLPEVCGRVCPQDRLCEGACTLNDGFGAVTIGS 124

Query: 121 VEKYITDTAIAQGWRPDMSKVTPRKEKVAIVGAGPAGLGCADILARNGVKAVVFDKYPQI 180
           VEKYITDTA A GWRPDMSKV P  ++VA++GAGPAGLGCAD+L R GV  VVFDK P+I
Sbjct: 125 VEKYITDTAFAMGWRPDMSKVKPTGKRVAVIGAGPAGLGCADVLVRGGVTPVVFDKNPEI 184

Query: 181 GGLLTYGIPAFKLDKAVMATRRTVLEGMGIEFKLGVTVGKDVAFNQLLEEYDAVFLGMGT 240
           GGLLT+GIP FKL+K V++ RR V  GMGIEF+L   VGKDV   QLLEEYDAVF+GMGT
Sbjct: 185 GGLLTFGIPEFKLEKTVLSNRREVFTGMGIEFRLNTEVGKDVTIEQLLEEYDAVFMGMGT 244

Query: 241 YTAMKAGLEGEDAQGVYQALPYLIGNTHHLMGSTSPDMPYLNLAGKRVVVLGGGDTAMDC 300
           YT MK G  GED  GV+ AL +LI N +  +G       ++++ GK+VVVLGGGDTAMDC
Sbjct: 245 YTYMKGGFAGEDLPGVHDALDFLIANVNRNLGFEKSPEDFVDMKGKKVVVLGGGDTAMDC 304

Query: 301 VRTAVRQGASSVICAYRRDEANMPGSRREVQNAREEGVNFLFNRQPVAIKTQDGKVLGVE 360
            RT++RQGA +V CAYRRDEANMPGSR+EV+NA+EEGV FL+NRQP+AI  +D +V GV+
Sbjct: 305 NRTSIRQGAKAVTCAYRRDEANMPGSRKEVKNAKEEGVKFLYNRQPIAIVGED-RVEGVK 363

Query: 361 CVETQMGKADASGRQRAEAIVGSEQLLEADAVIIAFGFQPSPAPWFADYGIELDQWGRVK 420
            VET++G+ DA GR+  E I GSE+++ ADAV+IAFGF+PSPA WF  + I+ D  GRV 
Sbjct: 364 VVETRLGEPDARGRRSPEPIPGSEEIIPADAVVIAFGFRPSPASWFEQFSIQTDSQGRVV 423

Query: 421 ASKQADNPFQTTNPKVFAGGDMVRGSDLVVTAIAEGRDAAQGILNYL 467
           A +Q     QT+NPK+FAGGDMVRGSDLVVTAI EGR+AA+GIL+YL
Sbjct: 424 APEQGQYKHQTSNPKIFAGGDMVRGSDLVVTAIFEGRNAAEGILDYL 470