Pairwise Alignments

Query, 468 a.a., glutamate synthase, small subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 481 a.a., glutamate synthase [NADPH] small chain from Phaeobacter inhibens DSM 17395

 Score =  423 bits (1088), Expect = e-123
 Identities = 225/465 (48%), Positives = 290/465 (62%), Gaps = 8/465 (1%)

Query: 6   QFIEVGRKDPTKHPAAKRSTQFIEIYQPFAQAQVSEQADRCLDCGNPYCEWKCPLHNYIP 65
           +F+++ R  P+K  A  R   F EIY  FA A+  EQA RC  CG PYC+  CPLHN IP
Sbjct: 8   KFVQIDRDMPSKRAAEDRREDFDEIYAEFAAAKAEEQASRCSQCGVPYCQSHCPLHNNIP 67

Query: 66  NWLKLAQQGRIMEAADLVHETNTLPEICGRVCPQDRLCEGACTLN-ADFGAVTIGNVEKY 124
           +WL+L   GR+ EA +    TNT PEICGR+CPQDRLCEG C +  +  G VTIG VEKY
Sbjct: 68  DWLRLTATGRLQEAYETSQATNTFPEICGRICPQDRLCEGNCVIEQSGHGTVTIGAVEKY 127

Query: 125 ITDTAIAQGWRPDMSKVTPRKEKVAIVGAGPAGLGCADILARNGVKAVVFDKYPQIGGLL 184
           ITDTA  +GW   +     R E V I+GAGP GL  AD+L R GVK  ++D+Y + GGLL
Sbjct: 128 ITDTAWDKGWVQPIKPAHERSESVGIIGAGPGGLAAADMLRRAGVKVTIYDRYDRAGGLL 187

Query: 185 TYGIPAFKLDKAVMATRRTVLEGMGIEFKLGVTVGKDVAFNQLLEEYDAVFLGMGTYTAM 244
           TYGIP FKL+K V+  R  +L   G+EF +   VG+D++F  +  ++DAV +  G Y + 
Sbjct: 188 TYGIPGFKLEKDVVMRRNQLLADGGVEFVMNCNVGQDISFGDIRAKHDAVIIATGVYKSR 247

Query: 245 KAGLEGEDAQGVYQALPYL-IGNTHHLMGSTSP--DMPYLNLAGKRVVVLGGGDTAMDCV 301
              + G  A G+ +A+ +L + N     G      D   LN  GKRVVV+GGGDTAMDCV
Sbjct: 248 DLEMPGSGAAGIVKAIDFLTVSNKASNFGDRIEEFDNGTLNADGKRVVVIGGGDTAMDCV 307

Query: 302 RTAVRQGASSVICAYRRDEANMPGSRREVQNAREEGVNFLFNRQPVAIKTQDGKVLGVEC 361
           RT++RQGA+SV C YRRD ANMPGS+RE QNA EEGV F +   P       GKV GV  
Sbjct: 308 RTSIRQGATSVKCLYRRDRANMPGSQRETQNAEEEGVVFEWLSAPKGFTDDGGKVAGVMV 367

Query: 362 VETQMGKADASGRQRAEAIVGSEQLLEADAVIIAFGFQPSPAPWFADY-GIELDQWGRVK 420
            + ++G+ DASGRQ  E I G++ +  AD VI A GF+P   P   D   + + +WG VK
Sbjct: 368 QKMRLGQPDASGRQAPEVIEGADYIEPADLVIKALGFEPENLPTLWDQPELPVTRWGTVK 427

Query: 421 ASKQADNPFQTTNPKVFAGGDMVRGSDLVVTAIAEGRDAAQGILN 465
           A+ Q      T    V+A GD+VRG+ LVV AI +GRD A+ IL+
Sbjct: 428 ATFQTG---ATELDGVYAVGDIVRGASLVVWAIKDGRDCAEAILS 469