Pairwise Alignments

Query, 329 a.a., CobD-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 303 a.a., Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) from Xanthomonas campestris pv. campestris strain 8004

 Score = 90.5 bits (223), Expect = 5e-23
 Identities = 81/297 (27%), Positives = 132/297 (44%), Gaps = 17/297 (5%)

Query: 21  LVLFFALLLARLAPLPREMQPLIWFSHLAKQLAAKVNRPGRAPSQQATAGFLAMLLLVFP 80
           L+   A+LL  L   P    PL+ F   A+++ A+++R  RA      AG LA  + V P
Sbjct: 4   LIATAAVLLDLLLGEPARAHPLVLFGGWAQRIEARLHRDMRA------AGVLAWCVAVLP 57

Query: 81  FWAIITFLLELAAFPWF------FEFLVLYLCLSDAGFSQVADEIAKALNREDNASAKKL 134
            WA +  L++LA + W       F  + LYL L      + A  +A+AL   D  +A+  
Sbjct: 58  -WAAVAALVQLALWWWSAWAGAAFAAVALYLALGLRSLGEHAVPVAQALRAGDLPAARAA 116

Query: 135 LQPWVVRDTDNLSEVGLTKATIEKLATAPIYGTASTIFFFAIAGAPMVLAVRMIKQLELS 194
           +   V RDT  L E  +  A  E +         + +F+  + GAP  +  R+   L+  
Sbjct: 117 VGRIVSRDTATLDEAQVAAAATESVLENGSDAVFAALFWGVLLGAPGAVLYRLSNTLDAM 176

Query: 195 WPPIQPKYQYFCRTVHTLSTALLAIPAWLWSLSIAIQGGPKA-LALLFRTSKNHPALR-G 252
           W    P+YQ F      +  AL  +PA + +L+ A+ G  +A +   +R  +   +   G
Sbjct: 177 WGYRTPRYQRFGWAAARMDDALNWLPARMTALTYAVLGQTRAGVRCAWRQGRGWKSPNAG 236

Query: 253 YVMSVSLVANILRIELGGPQKFSGQRIDVAKVVYGPQPHHEMIAPAIKLTSRACAIW 309
            VM+    A  L+++LGGP  + GQ      +  G       +  A+ L     A+W
Sbjct: 237 PVMAAG--AGALQVQLGGPAPYHGQWQHRPSLGEGAAADAGSVLRALWLVRAGVALW 291