Pairwise Alignments

Query, 329 a.a., CobD-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 336 a.a., Cobalamin biosynthesis protein CbiB (NCBI) from Rhodospirillum rubrum S1H

 Score = 53.5 bits (127), Expect = 7e-12
 Identities = 72/319 (22%), Positives = 119/319 (37%), Gaps = 18/319 (5%)

Query: 21  LVLFFALLLARLAPLPREM-QPLIWFSHLAKQLAAKVNRPGRAPSQQATAGFLAMLLLV- 78
           L L F   L  + PL R +  P++        L  ++NR  R  + +   G   +++LV 
Sbjct: 21  LALVFDAYLGGMGPLFRLIPHPVVVMGGAIDALEQRLNRAERDDATRKRRGVFTVIVLVG 80

Query: 79  --FPFWAIITFLLELAAFPWFFEFLVLYLCLSDAGFSQVADEIAKALNREDNASAKKLLQ 136
                   +  L  + A  W  E L+    L+          +A  L      + ++ + 
Sbjct: 81  AAIGLGVALQALASVLAVGWVLELLLAVALLAQRELHDHVAAVADGLETGGIDAGREAVS 140

Query: 137 PWVVRDTDNLSEVGLTKATIEKLATAPIYGTASTIFFFAIAGAPMVLAVRMIKQLELSWP 196
             V RD   L   G+ +  +E LA     G  + +F+F + G P +LA +MI  ++    
Sbjct: 141 HIVGRDPALLDHAGVGRGALESLAENFSDGVVAPVFWFVLFGLPGLLAYKMINTMDSMIG 200

Query: 197 PIQPKYQYFCRTVHTLSTALLAIPAWLWSLSIAIQGGPK-------ALALLFRTSKNHPA 249
              P+ + F      L   +  IPA L  L +      K       A  ++ R +  H +
Sbjct: 201 HRTPRLRAFGWAAARLDDGVNLIPARLSGLLLIAAALTKPWADARAAFVVMLRDAGKHRS 260

Query: 250 LRGYVMSVSLVANILRIELGGPQKFSGQRIDVAKVV----YGPQPHHEMIAPAIKLTSRA 305
                     +A  L + L GP+ + G+       V     G  P  + I   + L   A
Sbjct: 261 PNA-GWPEGAMAGALGLRLSGPRVYKGEAPRDEPYVGDGRAGVTP--KDIRRGLALFRSA 317

Query: 306 CAIWFSFITLLPFIWAGLR 324
           C I  + I LL    A LR
Sbjct: 318 CLIEGALIALLAIALAVLR 336