Pairwise Alignments

Query, 329 a.a., CobD-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 306 a.a., cobalamin biosynthesis protein cobD/CbiB from Dechlorosoma suillum PS

 Score = 57.4 bits (137), Expect = 4e-13
 Identities = 73/310 (23%), Positives = 121/310 (39%), Gaps = 19/310 (6%)

Query: 23  LFFALLLARLAPLPREM--QPLIWFSHLAKQLAAKVNRPGRAPSQQATAGFLAMLLLVFP 80
           L  AL L +  PLP  +  +P+      A  L +++N      +  +  G +A L  V P
Sbjct: 6   LIAALFLEQFRPLPNRLLLEPV---GRYADFLESRLN------AGDSRHGLIAWLAAVLP 56

Query: 81  --FWAIITFLLELAAFP---WFFEFLVLYLCLSDAGFSQVADEIAKALNREDNASAKKLL 135
               A   + L  A  P   W +  LVLYL +    FS    +I  AL   D   A++LL
Sbjct: 57  PVLLAAGIYYLLCAVTPLLGWAWNVLVLYLTMGFRQFSHHFTDIHLALRMGDVPRARQLL 116

Query: 136 QPWVVRDTDNLSEVGLTKATIEKLATAPIYGTASTIFFFAIAGAPM-VLAVRMIKQLELS 194
             W  R  + LS   + +  IE+   A      + I  F +   P   +  R+   L   
Sbjct: 117 AEWRGRSAEGLSSSEVARLAIEEALAASHRHVFAVILCFVLLPGPCGAVLYRLAGILAER 176

Query: 195 WPPIQPK-YQYFCRTVHTLSTALLAIPAWLWSLSIAIQGGPKALALLFRTSKNHPALRGY 253
           W   Q + +  F +    +   +  +P    + + A+ G  +     +RT     A    
Sbjct: 177 WGQRQDEEFGDFGKFSQQIFAIIDWLPLRATAAAFAVVGDFEDAVYCWRTQAGQWADHEL 236

Query: 254 VMSVSLVANILRIELGGPQKFSGQRIDVAKVVYGPQPHHEMIAPAIKLTSRACAIWFSFI 313
            + +S  A  L + LG P    G+  D A++  G +   + +   + L  RA  +W   +
Sbjct: 237 GIVLSSGAGALGVRLGQPLVEGGEVTDRAELGVGEEADVDFMQSTVGLVWRALVLWLLLL 296

Query: 314 TLLPF-IWAG 322
            L+    W G
Sbjct: 297 LLIGLATWVG 306