Pairwise Alignments

Query, 329 a.a., CobD-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 323 a.a., cobalamin biosynthesis protein CobD from Dechlorosoma suillum PS

 Score = 70.5 bits (171), Expect = 5e-17
 Identities = 77/297 (25%), Positives = 116/297 (39%), Gaps = 9/297 (3%)

Query: 29  LARLAPLPREMQPLIWFSHLAKQLAAKVNRPGRAPSQQATAGFLAMLLLVFPFWAIITFL 88
           L RL   PR   PL+ F  LA  L  K  RP  A + ++      +L   F     +   
Sbjct: 17  LDRLLGEPRRGHPLVAFGALAN-LLEKALRPPPAVASRSALRIFGLLAWSFAVLPPVLLA 75

Query: 89  LELAAFPWF---FEFLVLYLCLSDAGFSQVADEIAKALNREDNASAKKLLQPWVVRDTDN 145
              +A PW     +  +LY  L      + AD +A  L   D A+A++ +   V RDT  
Sbjct: 76  AWASATPWLGILADAGLLYFALGARSLKEHADAVAVPLAGGDLATARQKVGYMVSRDTTA 135

Query: 146 LSEVGLTKATIEKLATAPIYGTASTIFFFAIAGAPMVLAVRMIKQLELSWPPIQPKYQYF 205
           L E G+ KA +E +          T+F+FA+ G P  L  R+   L+  W     ++ +F
Sbjct: 136 LDESGVAKACVESVLENGNDAVFGTLFWFALLGGPGALLFRLANTLDAMWGYKNERFLHF 195

Query: 206 CRTVHTLSTALLAIPAWLWSLSIAIQGGPKALALLFRTSKN--HPALRGYVMSVSLVANI 263
                 L   L    A L +L+ A  G  +     ++           G VM+    A  
Sbjct: 196 GWAAARLDDLLNWPAARLTALTYAWLGNTRRALACWKAQAPTWESPNAGPVMAAG--AGS 253

Query: 264 LRIELGGPQKFSGQRIDVAKVVYGPQPHHEMIAPAIKLTSRACAIWF-SFITLLPFI 319
           L + LGG   + G+      +  G       I  A  L  R   +W  + + LLP I
Sbjct: 254 LGVLLGGAAIYHGREEQRPPLGEGRPAAAFDIDRASHLVQRGLVLWLAAIVALLPLI 310